Brumicola nitratireducens: GNIT_0723
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Entry
GNIT_0723 CDS
T01632
Symbol
rumA
Name
(GenBank) RNA methyltransferase, TrmA family protein
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
gni
Brumicola nitratireducens
Brite
KEGG Orthology (KO) [BR:
gni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gni03009
]
GNIT_0723 (rumA)
Enzymes [BR:
gni01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
GNIT_0723 (rumA)
Ribosome biogenesis [BR:
gni03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GNIT_0723 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_11
Methyltransf_32
RrnaAD
PCMT
DOT1
MTS
Motif
Other DBs
NCBI-ProteinID:
AEP28867
UniProt:
G4QFT2
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All DBs
Position
800173..801609
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AA seq
478 aa
AA seq
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MVQFFKAKKPSSSGKKRPQRNRTQVKAEHEFVEFSADVIDHHGNGICLSHQPIIVVPATI
PGESYRVEILTKKQKVWHGKIAKVLQVHESARVEPFCPYVTTCGGCSHQAFRADYLIEAK
QASLKSYLENVISSSRLKHCEWGDAIHSDISDMQHGYRRRARLAIDARNPDEIKIGFRQE
KSNKVVDIPKCAVLVESLHDVYAQLVSLIKRLPSVSSIGHITLTEGSERAQVCLHLTKSL
SAESVNMLVAEQKASGTEYVIESKGSKLLNVSVLDGADKSSDVGEDVIFDAKFSISDIPS
LKIAVTANNFIQVNKHVNQQMLRLAKEWLNPSAEDCIVDLFSGMGNFSLALASYCKEVIG
VEGIPEMVQQASANAQLNGISNCRFEHFDLNNLAAKATLDIPQGALFIVDPSRAGALEIM
KVISVFKPQKILYVSCNPTSFARDVEVLPNTYEITKIRALDMFPFTKHIEMIALISSK
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtggttcagttttttaaagcaaaaaagccctcatcttcaggtaaaaaaagacctcaaaga
aaccgtactcaagtaaaggccgagcacgagtttgtcgagttttcagcggacgttattgat
caccacggcaacggcatatgcctatctcatcaaccgattatcgttgtacctgcgacaatt
ccaggtgaatcgtatcgagtagaaatactcactaaaaagcaaaaggtatggcatggtaaa
attgcaaaggtcttgcaagtgcatgaatctgctcgcgttgagccattttgtccttatgta
actacttgtggaggatgctcgcaccaagcatttcgcgctgactatttaattgaagcaaag
caagctagtctgaaaagctacttagagaatgttatttcttcgtcaagactaaagcactgt
gaatggggtgatgcaatacattcggatatatcggatatgcaacatggataccgtcgtcgc
gctcgcttggctatcgatgctcgtaatccagacgagattaaaattggatttcgacaagag
aagtcgaataaagttgttgatataccgaagtgtgcggttttagttgagtcactgcacgat
gtttacgcccaattagtcagtttaattaaacgccttccgagtgtttcctctatcggtcat
atcacgttaactgaaggttctgaaagggcgcaggtttgtctacatttaactaagagctta
agtgccgaatcagtgaacatgttagttgcagagcaaaaagcttccggcacagaatatgta
atagaaagcaaaggttcaaagctcctaaatgtttcggtattagatggagcggataaaagt
agtgacgtaggtgaagatgtaatttttgatgcgaaattcagcatttcggacattccatcg
ttgaaaattgcagtaactgctaataattttatacaggtcaacaaacatgtgaaccagcag
atgctgcgcttagcgaaagaatggttaaatcccagcgctgaggactgcattgttgattta
ttttcgggcatgggcaacttttcgttggctttagcttcttattgtaaagaagttattggc
gttgaaggtatccctgaaatggtgcaacaagctagcgcaaatgcacagttaaatggcatt
agcaattgtcgctttgaacactttgacttgaataacttggccgcaaaggcaacacttgat
atacctcagggcgctctctttatagtcgatccgtcgcgcgcaggtgctctggaaattatg
aaggtaatatcggtttttaaaccacaaaaaatattgtacgtttcttgcaatccgactagt
ttcgcgagggatgtagaagttttgccaaacacatacgagattactaaaattagagcactt
gatatgtttccgttcacaaagcatattgagatgatagctttaatcagctcaaagtag
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