Brumicola nitratireducens: GNIT_1235
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Entry
GNIT_1235 CDS
T01632
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
gni
Brumicola nitratireducens
Pathway
gni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GNIT_1235 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gni03400
]
GNIT_1235 (ruvB)
Enzymes [BR:
gni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GNIT_1235 (ruvB)
DNA repair and recombination proteins [BR:
gni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GNIT_1235 (ruvB)
RecFOR pathway proteins
GNIT_1235 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
nSTAND3
AAA_14
Mg_chelatase
RNA_helicase
AAA_3
AAA_16
Rad17
AAA_18
NTPase_1
TIP49
AAA_17
Bac_DnaA
Sigma54_activ_2
AAA_2
NB-ARC
TniB
AAA_28
AAA_24
TsaE
ABC_tran
ATP-synt_ab
NPHP3_N
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
AEP29362
UniProt:
G4QKX2
LinkDB
All DBs
Position
1338781..1339791
Genome browser
AA seq
336 aa
AA seq
DB search
MIEADRLIQAVADPEDEVIDRAIRPKMLSDYTGQAHVCEQMEIFIQAARKRSDALDHLLI
FGPPGLGKTTLANIVANEMGVNIKTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYNVSDLTDIIQRSASYLNLSMDKEGAFEMAKRSRGTPRIANRLLRRVRDYAEIKADG
NINADVAAKALNMLDVDNKGFDFMDRKLLLAIIEKFMGGPVGLDNIAAAIGEEKETIEDV
IEPYLIQQGFLQRTPRGRIATQHAYLHFGLTMPKID
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcagatcgcttaatacaagccgttgctgatccagaagatgaagttatcgat
cgcgcaattcgacccaaaatgctcagcgactatactggtcaagctcatgtttgtgaacaa
atggaaatattcatccaagcggctagaaagcgcagtgatgcgcttgaccatctgctcata
tttggacctccaggcttaggtaaaacaactttggccaacatcgttgccaacgaaatgggg
gtaaatataaaaactacctcaggaccggtattggaaaaagccggtgatttggctgcttta
cttaccaaccttgaagaaaacgatgtgttgttcatcgatgaaattcatcgcttaagtccg
gttgtcgaagaaattttgtatcctgcgatggaagattatcaattagatattatgattggc
gaagggcccgcagcgcgcagcattaaacttgacctacctccatttacactaattggtgca
accacgcgagccggttcgttaacctctccattgcgagaccgttttggaattgtgcagcgt
ttagagttctacaatgtttctgatttgaccgacatcattcagcgcagtgcttcgtattta
aatctaagtatggataaagagggcgcatttgagatggcaaaacgctctcgcggcacccct
cgaattgctaaccgcttattgcgcagagtaagagactacgctgaaattaaagccgacggt
aatattaatgcagacgtcgcagctaaagcgctgaatatgcttgacgttgataataaaggc
ttcgactttatggatcgtaagttgttgctagccattattgagaaatttatgggcggacct
gttggattagacaatattgcagcggccatcggcgaagaaaaagaaaccattgaagacgta
atagagccatatctaattcaacaaggctttttacaacgaacgccacgtggacgaattgca
acccaacatgcatatttgcactttggcttgaccatgccaaaaatcgactaa
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