Brumicola nitratireducens: GNIT_1475
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Entry
GNIT_1475 CDS
T01632
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gni
Brumicola nitratireducens
Pathway
gni03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GNIT_1475 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gni03019
]
GNIT_1475 (recQ)
03400 DNA repair and recombination proteins [BR:
gni03400
]
GNIT_1475 (recQ)
Enzymes [BR:
gni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GNIT_1475 (recQ)
Messenger RNA biogenesis [BR:
gni03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GNIT_1475 (recQ)
DNA repair and recombination proteins [BR:
gni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GNIT_1475 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
RecQ_Zn_bind
HRDC
HTH_40
ResIII
HTH_Tnp_IS630
Motif
Other DBs
NCBI-ProteinID:
AEP29594
UniProt:
G4QEQ5
LinkDB
All DBs
Position
1600230..1602434
Genome browser
AA seq
734 aa
AA seq
DB search
MTLPTSSSKLENAQAILKDVFGFDSFRSTQQGIIESVLEHNNTLAIMPTGGGKSLCYQIP
AIVFDGLTVVISPLISLMQDQVRQLVELDISAGVLNSSLSSDEYQNNLVSLKNGEIKLLF
LAPETALQPNILSLLQSIHVACIAIDEAHCISEWGHEFRPEYRQLDQLVSRFPDAVTVAL
TATATPRVREDIKRQLNISNESEFIASFDRPNLYLEVAPKESAYAQTKTFIDKHAKQSGI
IYCQSRSGVDDLTTKLKQDGYSVLPYHAGLNNQKRASNQEKFVRDDVDIIVATIAFGMGI
NKPDVRYVVHYDLPKNIESYYQQIGRAGRDGDDADCLLLFGYGDTGKIRFFIDQMNNEHE
KRLATMHLNQMLALAETEECRRLPLLQYFGESEVSETCVKCDNCLSDDKQKSDLTVPAQK
FLSCVHRTGQRFGAAYIVDVLRGSNAEKVLQNQHNLLSTYDIGNELDKKQWIALSRQLIQ
KKLLRQDEQFGGLKLTQLATDVLKGKVPFYAMLQQAVPEKRSSTSKSDVIGNSELMAILK
SERKRIADQANVPPYAIFADRSLQEMAYYFPHSKQSLLQIHGVGSAKLSKYADLFLSIIA
EFCSQHNLQEVPNAQSASAQVKKAVAKTSSVSSKTKGVVEEFENGSSVANLSRLMKVKEN
TIYSHLYKYAQTANRMDKPERLIEEAKLTEAQVLEGCAAFEEHGSERLKPVYEALSEKFS
YEQLHLLRVFYLQS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaccttacccactagcagcagtaaattggaaaacgcccaagcgatccttaaagacgta
tttggatttgattcctttcgttccacccagcagggaattattgaaagtgtgcttgaacat
aacaatactctggccattatgcccactggtggcggaaagtctctgtgctaccagattcca
gcgattgtattcgatggtctgacagttgtcatatcgcccttaatttcactaatgcaagat
caagtaagacaattggtggagctcgatatttctgcaggcgtattaaatagctcgctcagc
agtgatgaatatcaaaacaatctagttagtttaaagaatggtgaaattaaactgttgttt
ttagcacctgaaactgcgcttcaaccgaatatccttagtttattacagagtattcatgtg
gcgtgtattgccattgatgaggcacattgtatttcggagtggggacatgagtttagacca
gaataccgccagttagatcagcttgtatcgcgcttccccgacgcagtgacggtcgcactt
accgctacagcaacgcctagagtcagagaagatataaaacgtcagcttaatataagtaac
gaaagtgagttcatcgcaagctttgaccgtcccaatttgtatcttgaagtagcaccgaag
gaatcagcatacgcgcagaccaagactttcatagacaaacatgccaaacagtcaggcatt
atttactgtcaatcacgctctggagtagacgacttaacaacaaagcttaaacaggacggc
tactctgtactgccttaccatgcaggtttaaataatcaaaaacgtgcttcaaaccaagag
aagtttgtgcgcgatgacgttgatattattgttgcaactattgcctttggaatgggtatt
aacaagcccgatgtgcgctatgtggtgcattacgatttacctaaaaatattgaaagttat
tatcaacaaattgggcgtgccggtcgagatggtgacgatgctgattgcctactattattt
ggttacggtgataccggtaaaattcggttctttattgaccaaatgaacaacgagcatgaa
aagcggcttgccaccatgcacttaaatcagatgctggcgttggccgaaacggaagaatgc
cgaagactaccgttattgcagtactttggtgagtctgaagttagtgaaacctgcgtgaaa
tgcgataactgtttgagtgacgataagcagaaatctgatttaaccgtgccagcgcagaaa
tttttatcttgtgtgcatagaactgggcaacgctttggcgccgcgtatatagttgacgtg
ctgcgtggttcaaatgcggaaaaggtgctgcaaaaccaacacaatttattgtcaacctac
gacatcggtaatgagctagataaaaaacaatggatagcactgtcgcgacagcttattcaa
aagaaattattgcgtcaagatgaacaatttggtggtttaaagttaactcagttagcaact
gatgtattaaaaggcaaggtgcctttttacgctatgctgcagcaagcagtgcctgaaaag
cgatcatcaacatcaaagtcagatgtcattggcaacagtgagcttatggccatattgaaa
agcgaacgaaagaggattgcagaccaagcaaatgtgcctccttacgctatatttgccgat
agaagcttacaagaaatggcgtattattttcctcattcaaaacaaagtttactgcaaatt
cacggtgtaggtagcgctaagttgagcaagtatgcagatttgtttttgtcaattattgca
gaattttgctcgcagcataatttgcaagaggttccaaacgcccaaagtgctagtgctcag
gtgaaaaaggcagttgccaaaacgtctagtgtcagcagcaagacaaaaggggttgtggag
gaatttgaaaatggcagttcggttgcaaacttatcacgcttgatgaaagttaaagaaaat
acaatttatagccatttgtataagtacgcccagaccgcaaatagaatggataaaccggag
cgattaatagaagaagcaaagctaactgaagcacaagttttagaggggtgtgcagcattt
gaagaacatggtagtgaaagattgaaaccggtgtacgaagcgctaagtgagaagtttagt
tatgagcagctgcatttgctaagagtgttttacttgcaaagctga
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