Brumicola nitratireducens: GNIT_1873
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Entry
GNIT_1873 CDS
T01632
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
gni
Brumicola nitratireducens
Brite
KEGG Orthology (KO) [BR:
gni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gni03400
]
GNIT_1873 (phrB)
Enzymes [BR:
gni01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GNIT_1873 (phrB)
DNA repair and recombination proteins [BR:
gni03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GNIT_1873 (phrB)
Prokaryotic type
GNIT_1873 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AEP29982
UniProt:
G4QHJ6
LinkDB
All DBs
Position
2049804..2051249
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AA seq
481 aa
AA seq
DB search
MWFKRDLRLRDNEALKTACEQNRPLALIYIVEPIMLNDPHMDIRHWRFIVQSIKDLNEQL
AEYNSSISILYGAALDVFSQLHEKYQIKQIVSHQEVGLTHTYSRDKSVSNWCTNNKVDWT
ELAQGAVYRPLNTRKNWPQLWNERILRSASQPELEDIQCISTISDSLDSQYIFTVPKLWL
TADDNMQLGGEKRAWYTLKHFFKERGKAYFGNIGDPSMSRQTCSRLSPYLAWGNISLKQV
YQFSLTQTERKGWARSITAFQSRLHWHCHFIQKFETESAMEFRPINKAYLDFPYCEGKEE
ELRLHAWKTGCTGVPIVDACMRAVVKTGYINFRMRAMVVSFLCHHLNIDWRKGASFLGAQ
FLDFEPGIHYPQFQMQAGVTGINTLRIYNPVKQSIDKDQEGLFIKKWLPQLEPLPNPLIH
QPWVITPMEEAMYDFNCERDYYSPIIDVEKEAKAARDRMWAYRDKPAVKKEASRILKIHT
I
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtggtttaagagagatctgcgtttacgcgataacgaagcgctgaaaactgcctgtgag
cagaatagaccactagcgctcatctatatcgtcgagcctatcatgctaaacgacccgcat
atggatattcgccattggcgtttcatcgtgcagtcaattaaagatctgaatgagcaacta
gctgagtataattcgtctatttcaatactttatggagctgcgctagatgttttctcacag
ttacatgaaaaatatcagataaagcagatcgtcagtcaccaagaagtgggcttaacgcat
acttactcaagagataaatccgtttctaattggtgcacaaacaataaagtagactggaca
gaacttgcacaaggcgccgtttaccgaccattgaatactcgaaaaaattggccacagctc
tggaatgaaagaatattacgttctgcgagtcagcccgaacttgaagatatacagtgtatt
tcaactatcagcgacagcttagactctcaatacattttcaccgtccctaaactttggctc
acagctgacgataatatgcagctaggcggcgaaaagcgcgcttggtatacgttgaagcac
ttctttaaagaaagaggcaaagcttacttcggcaatattggtgaccccagcatgtctcga
caaacttgcagtcggctatctccttacttggcttggggaaacatttctttaaaacaggtt
tatcaatttagtttgacacaaactgagcgcaagggatgggcaagatctatcaccgctttc
cagtcacgattacactggcattgtcactttattcagaagtttgaaactgagtcggctatg
gagtttcgacctattaacaaagcctatcttgatttcccctattgtgaaggtaaagaagag
gagctcaggttgcatgcttggaaaacgggatgcacgggtgtgcctattgtcgatgcttgc
atgcgtgccgtcgttaagacgggatatattaatttcagaatgagagcaatggtagttagc
tttttatgccaccatctcaacatcgattggcgcaaaggcgctagttttctgggtgcccaa
tttttagattttgaacccggaatacattatcctcaatttcaaatgcaggctggcgttaca
ggcattaatacgctgcgcatttataatcccgtaaagcaatctatcgacaaggaccaagaa
ggtctgtttatcaaaaaatggttgccacaacttgaaccattaccgaatccactcatacat
caaccttgggtaataacgccgatggaggaagcaatgtacgatttcaattgcgaaagagat
tactactctccaatcattgatgtggagaaagaggcaaaagcggcaagagatagaatgtgg
gcttatcgagacaagcctgcggtaaaaaaagaggcgtcacgaatattaaagatacacaca
atctaa
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