Brumicola nitratireducens: GNIT_2443
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Entry
GNIT_2443 CDS
T01632
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gni
Brumicola nitratireducens
Pathway
gni03030
DNA replication
gni03430
Mismatch repair
gni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GNIT_2443 (dnaE)
03430 Mismatch repair
GNIT_2443 (dnaE)
03440 Homologous recombination
GNIT_2443 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gni03032
]
GNIT_2443 (dnaE)
03400 DNA repair and recombination proteins [BR:
gni03400
]
GNIT_2443 (dnaE)
Enzymes [BR:
gni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GNIT_2443 (dnaE)
DNA replication proteins [BR:
gni03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GNIT_2443 (dnaE)
DNA repair and recombination proteins [BR:
gni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GNIT_2443 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AEP30540
UniProt:
G4QI07
LinkDB
All DBs
Position
complement(2692999..2696418)
Genome browser
AA seq
1139 aa
AA seq
DB search
MQDGLNKVKPILAKTKSMNMPAIAITDLMNMCGLVKFYSEAFNIGVKPIIGCDIWLLSPH
FPNEITRLTLIAKNIKGYKNITEIISKAYRQGHVQHKVVVRQEWLAEYAEGVIVLSGALA
GDLGIALTKNNPDIANNITAFFQQYFHEHFYVELVRTGRDGEEDYIHRAVEWAAQNDLPV
VATNEVCFIDQIGFEPHEVRVCISEGYTLDDKRRPKKHSEQQYLRSAEEMIELFKDIPSA
IENTIEIAKRCNAELTLGEYFLPQFPTGDMTTEDFLVKVSEEGLERRLIKIFADEEERKE
KRPEYDERLAIELKVINQMGFPGYFLIVMEFIQWSKDNNIPVGPGRGSGAGSLVAYALDI
TDLDPLEFDLLFERFLNPERVSMPDFDIDFCMDRRDEVIDHVADIYGRDAVSQIITFGTM
AAKAVIRDVGRVLGHPYGFVDRISKLIPMDPGMTLEKAFAVEPRLPELYEEDEDVKDLID
TARILEGVTRNAGKHAGGVVISPTTITDFSPLYCDDTGSNPVTQFDKNDVETAGLVKFDF
LGLRTLTIIQWAIDMVKEVQGIDIDITQIPLEDPKCFRVLQKAETTAVFQLESRGMKDLI
NRLKPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREAISYPDAEYQHECLQEILEPT
YGIILYQEQVMQIAQVMSGYSLGGADLLRRAMGKKNAQEMAKQRASFEQGAADNNIDPEL
SIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPAEFMAAVMSADMDNTDKIVTL
VDECGHMNIDILPPDLNAGEYKFTVNSDGQIVYGIGAIKGVGEGPVEAIIEAREQQGKFK
DLFDFCAKVDVKRVNKRVLEKLVLSGAMDNLGPHRAALMATIKDALNAASQHAKAELAGQ
ADLFGVQIESEEDITSAFAKVPKWSEKVWLDGEKETLGLYLTGHPINQYLKEIKQYTDGR
LADLTPTNRDQFISTVGLVIGVRVMTNKKGRRWGIVTLDDKSARMDVRFYPDMYEQFESV
LVSDNLLWVKGQVSFDEFSGGNTINAKDVLTIVQARSKYVKQLKISIPEKLCTLSTVAKV
QGILQVYKNGTCPLHIHVEHEDVEVTIASGTQWCVEPEEQLLVELRHILGAEQVNLEFN
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacggcttgaacaaagtaaagccgatcttagcaaaaacaaaatccatgaatatg
ccggcaattgcgatcaccgatctcatgaatatgtgtggcttagtgaagttctattctgaa
gcctttaatattggtgtaaagccgattatcggctgtgatatatggttattgtcaccgcat
tttccgaatgaaataacacgtttaaccttaattgctaaaaatatcaaaggttataaaaac
atcaccgaaatcatttccaaagcctataggcaaggacatgtgcagcataaagttgtggtg
cgccaagaatggcttgctgaatacgcagaaggtgtcattgtgttatctggcgcgttagcg
ggcgatttaggcatagcattaactaaaaataatcctgacattgctaataatatcaccgca
ttttttcagcaatattttcatgagcacttttatgtggaattggttcgcaccgggcgtgat
ggtgaagaagactatattcatcgcgctgtcgagtgggcggctcaaaatgatctgcctgtt
gttgcaactaatgaagtttgcttcatcgaccaaataggttttgaaccacacgaagtgcga
gtttgcattagtgaaggttacacactcgacgacaaaagacgtcctaaaaaacacagcgaa
caacaatatttgcgcagcgctgaagaaatgattgagctgttcaaggatattccttcagca
attgaaaatacgattgagattgctaaacgctgcaacgctgaacttacgcttggcgagtac
ttcttgccgcagtttccaactggcgacatgaccactgaagatttcttggtgaaagtgtca
gaagaaggcttagaacgtcgtttaatcaagatttttgcggatgaagaagagcgtaaggaa
aaacgccctgagtatgacgagcgtctggcaatagaacttaaagtaattaaccaaatgggc
tttcctggttacttcttgatcgtaatggaatttatccaatggtcgaaggataacaacatt
ccggttggccctggacgtggttcaggtgcaggttcactcgtggcttatgcactagatatt
accgatcttgacccgctagaattcgacctactattcgagcgattcttgaatccagaacgg
gtatcaatgcccgattttgacatcgacttttgcatggatcgccgcgacgaagttatcgac
catgtggcggacatttacggtcgtgatgccgtatcacaaattattactttcgggacaatg
gcggcgaaggccgttatacgggacgttggtcgagtgctaggtcatccatatggctttgta
gaccgaatttctaagttaatacccatggatccgggcatgaccctagaaaaagcatttgcg
gtagagcctcgcttacccgagctttatgaagaagacgaagatgtaaaagatcttatcgat
acggcgcgtattttagaaggcgtgactcgaaacgcaggtaaacatgcgggtggggtagtt
atatcacccactacgattacggatttttcgccgctctattgtgatgatactggctcaaat
cccgttacgcaatttgataagaacgacgttgaaacagcgggtttagttaagttcgatttt
ctaggtttgcgcacgctgaccattattcagtgggcaattgatatggttaaagaggtacag
ggtatcgatatcgatattacccaaatacctttagaagaccccaaatgctttagagtgctg
cagaaggctgaaacaacggcggtattccaactagaatctcgcggcatgaaagacttgatt
aatcgtctgaagcccgattgttttgaagatattatcgctctcgttgcattattcagaccc
ggcccgctgcagtcaggcatggttgataactttatcgacaggaagcacggacgtgaggcc
atttcatatccagatgctgaatatcaacatgagtgtttgcaagaaattcttgaaccaacc
tacggcattatcttataccaagaacaggttatgcagattgcgcaggttatgtcgggttac
tcacttggcggagctgacttgttgcgccgtgcaatgggcaagaaaaatgcacaagaaatg
gccaaacaacgagcttcatttgagcaaggagctgctgataacaacattgatcccgagcta
tcgataaagatattcgacttggttgaaaaatttgcaggttatggttttaacaaatcacac
tcagcggcctacgcattggtgtcctatcaaacgctatggttaaaaacacattatccagct
gaatttatggctgctgtgatgtcggcagatatggataataccgacaaaattgtgacctta
gttgacgagtgcgggcacatgaatatcgatattctaccgccggaccttaacgcaggtgaa
tacaagtttactgtgaatagcgacggccaaattgtttatggtattggcgcgattaaaggc
gtcggtgaaggacctgttgaagctattattgaggcgagagagcaacaaggtaagtttaaa
gacctatttgatttttgtgccaaggttgacgttaaacgagttaacaagcgagtacttgag
aaattagtactgagcggcgcgatggataatctaggtccgcacagagccgcgttaatggct
accatcaaagatgcactaaacgcggcgagtcagcacgcaaaggcagagcttgctggtcaa
gccgatttatttggtgtgcagatagagtctgaagaagacattaccagcgcattcgcaaaa
gtgcctaaatggtcagaaaaagtatggttggatggcgaaaaagaaaccttagggctatat
ttaactggccatccaattaatcaatatttgaaagaaataaagcaatacactgatgggcgc
ctagccgacctaacaccgaccaatcgcgatcagtttattagtaccgtaggactcgtgatt
ggtgttcgcgtgatgaccaataaaaagggtcgccgatggggaattgtgacattagacgat
aagtctgcgagaatggacgttagattttatccagatatgtacgaacagttcgaatctgtg
ctggtttcggataatttattgtgggtaaaaggacaggtcagctttgatgaattttcaggg
ggcaatacaataaacgcaaaagatgtgttaactattgttcaagctcgctctaaatacgta
aagcaattaaaaataagtatcccggaaaagttgtgtactttgtcaacagtcgctaaagtg
caggggatattgcaagtttataagaatggtacctgtccgctgcatattcatgtagagcat
gaagatgttgaggttactattgcatcgggtacacaatggtgtgtagagcctgaagaacaa
ttactagttgagttgcgccacatattgggcgcagagcaagttaacttagaatttaactaa
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