Brumicola nitratireducens: GNIT_2754
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Entry
GNIT_2754 CDS
T01632
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gni
Brumicola nitratireducens
Pathway
gni03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GNIT_2754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gni03400
]
GNIT_2754
Enzymes [BR:
gni01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GNIT_2754
DNA repair and recombination proteins [BR:
gni03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GNIT_2754
Prokaryotic type
GNIT_2754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEP30851
UniProt:
G4QID7
LinkDB
All DBs
Position
complement(3049399..3050106)
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AA seq
235 aa
AA seq
DB search
MQSWDPLLDLKGVSVDESAKLNNISDTFTAGLRSALAHVAIERAAGKVVYPADAEVFNAF
KLTQADALKVVILGQDPYHGPNQSHGLCFSVRKGNKIPPSLRNIYKELAADIPNFVIPSH
GDLSHWAEQGVLLLNTVLTVEQGQAHSHKKIGWEEFTDGVISTINRECENLIFLLWGAPA
QKKAALINEKRHTILTAVHPSPLSAHRGFFGCQHFSKTNQILSSQGKKPIDWQPK
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcttgggatccgctcctcgaccttaaaggggtcagcgttgatgaaagtgctaag
ctaaacaacattagcgatacatttaccgcaggcttacgaagcgcccttgctcatgtagcg
atagaacgagctgcgggcaaggttgtctatccggctgacgcagaggtgtttaacgctttc
aaactaactcaagctgacgccttgaaagtggtgattttaggacaggacccataccacggc
ccaaaccagtcccatggtttatgcttctcggttcgcaaagggaataaaatcccaccctcg
ttgcgcaatatctacaaagaactcgcagcagacattcctaatttcgtgatacctagtcat
ggtgatttaagtcactgggcagagcagggcgttttattgttgaataccgtgttgacggtc
gagcagggtcaggctcattctcataaaaaaataggttgggaggaatttactgacggcgta
atttcaacaattaaccgtgagtgcgagaatctgatatttttgttatggggtgcgccagca
cagaagaaagcagcactcattaatgaaaaacggcacactattttgaccgcggttcaccca
tctccgttatctgcacatcgtggtttttttggctgtcagcattttagcaaaacgaatcag
atactcagctcacagggtaagaagccaattgattggcagcctaaatag
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