KEGG   Brumicola nitratireducens: GNIT_2944
Entry
GNIT_2944         CDS       T01632                                 
Symbol
rhlE
Name
(GenBank) DEAD box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
gni  Brumicola nitratireducens
Pathway
gni03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gni00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GNIT_2944 (rhlE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gni03019]
    GNIT_2944 (rhlE)
Enzymes [BR:gni01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     GNIT_2944 (rhlE)
Messenger RNA biogenesis [BR:gni03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     GNIT_2944 (rhlE)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 HI1480 UvrD-helicase CMS1
Other DBs
NCBI-ProteinID: AEP31041
UniProt: G4QMV8
LinkDB
Position
complement(3265056..3266321)
AA seq 421 aa
MSFKSLGLSSLVLQAVEEKGYKQPSPIQEQGIPVVLEGKDIMAAAQTGTGKTAAFTLPIL
SMFENTKPASANNVKALILTPTRELAAQIDENIRYYGKHLNLKTQVVFGGVGINPQMIKL
RRGVDVLVATPGRLMDLYQQKAVKFSELEILVLDEADRMLDMGFIHDIKKIMALLPKKRQ
NLLFSATFSDDIRKLAKTIVNNPVEISVNPKNSTAKAVEQVIIPVDKTSKNKLLSHLIKE
NNWHQVLVFCRTKHGADRLAKFLIKQNITASAIHGNKSQGARTRALADFKSGGVQVLAAT
DIAARGIDISELPQIVNFDLPNIAEDYVHRIGRTGRAGATGHAYSFATIEDKKNISEIQS
LIGEVIATEIIKGFEPTEKLAPVALKAQKPKRPKKPRNPNADAANGNRESRGDRPKQPRR
K
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgtcatttaaatccttaggattatcctctcttgtccttcaagcggtagaagaaaaaggt
tataaacaaccgtcaccaatccaggaacaagggatcccggttgtactagaaggcaaggac
atcatggccgctgctcaaactggtactggaaaaacggcggcgtttacactaccaatactc
tctatgttcgagaataccaaacctgcttcggcaaacaatgttaaggcgcttattttaacg
ccaacgagagagcttgcggctcagatcgatgaaaatattcgctactatggcaaacattta
aatctgaagacgcaagttgtgtttggtggagtgggaattaacccgcaaatgatcaaattg
cgcagaggtgttgacgttttagttgcaacgccgggcagattaatggacttgtatcaacaa
aaagcagtgaagttttctgagcttgaaatattagtgcttgatgaagccgaccgtatgtta
gatatgggctttattcatgatattaagaagatcatggcgttacttcctaagaagagacaa
aatctgctcttctctgctacgttttctgatgacattcgaaagttagcgaaaacgatcgta
aataatccggtagaaatttcggttaatccaaagaacagcactgcaaaggctgtcgagcag
gtgattattcctgttgataaaacaagcaaaaacaaattgctgagtcatttaatcaaagag
aataattggcatcaagtgttggttttctgcagaactaaacacggcgcagacaggttagct
aaatttttaatcaaacaaaatattactgcctctgcaattcatggcaacaagagccaaggt
gctagaactagagcgttagccgattttaaaagcggtggcgttcaggtgttagcggcaacg
gatattgctgctagaggcatcgatattagtgagcttccacaaatcgttaacttcgattta
cctaacattgccgaagactacgtgcatagaattggtcgcacaggcagagcgggtgccacc
ggtcacgcatatagttttgctacaatagaagacaagaaaaatattagcgaaatacaaagc
ttgataggcgaagtgatagcaactgagatcattaaaggttttgagccaaccgagaagtta
gcgccagtagcgctaaaagcacaaaagccgaagcgccccaaaaagccaagaaacccgaat
gctgatgctgcaaatggcaatcgcgaaagtcgtggagatagaccaaaacagcctagaaga
aagtaa

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