Brumicola nitratireducens: GNIT_3063
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Entry
GNIT_3063 CDS
T01632
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
gni
Brumicola nitratireducens
Brite
KEGG Orthology (KO) [BR:
gni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gni03009
]
GNIT_3063 (dbpA)
Enzymes [BR:
gni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GNIT_3063 (dbpA)
Ribosome biogenesis [BR:
gni03009
]
Prokaryotic type
rRNA helicases
GNIT_3063 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
ERCC3_RAD25_C
Cas3-like_C_2
SLFN-g3_helicase
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AEP31158
UniProt:
G4QIK3
LinkDB
All DBs
Position
complement(3402616..3404040)
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AA seq
474 aa
AA seq
DB search
MEISMTSTDANSATSFSSLGLSEPLMEALNAIEFTHMTQTQQACLPDVLAGADVAVQAKT
GSGKTLAFGLALLSKIDVEAKNPQCLIMCPTRELAEQVAEQIRLLAKRMANLKVVSLVGG
MPMGPQIVSLRYGANVVVGTPGRIMDHIGKRTLSLKKVNCFVLDEADRMLDMGFEDEMRV
VMHHLSQTALASTRQTLLFSATFPDQIKSITDQYQRNAKIIKVEDGQSAPNIEQQAYRIS
NEHRTQAVAALLTHHQIESTIVFCRTRRETKELSDELYQMGFTAVGLHGDLEQSERSQVL
ARFANKTVSVLVATDVAARGLDIERVDLVINHRVSEDIDTHTHRIGRTGRAEEKGLAITL
IDDNEEGKLDEIAAKTDAKISKLHIQGVRFHANRIREPEFVCIAVDGGKRDKLRPGDILG
ALTKEAEIPGEDIGKISISARHTYIAIKARSVKRALSQFRERRIKGKRFKARKL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggaaattagcatgacatcaactgacgcaaacagcgccacttcattttctagcttaggt
ttatctgaacctttgatggaagctctaaatgcaattgagtttacgcacatgacgcaaact
caacaggcctgcttaccagatgtgttggcaggagctgatgttgcggtgcaggcgaaaaca
ggcagtggtaaaacacttgcatttggactagcgctgttaagtaaaattgatgttgaagcg
aaaaatccacagtgcctcattatgtgtccaacgcgtgagctggccgaacaagttgccgag
caaattcgcttgttggcaaaacgtatggctaatttgaaagtggtttcattagttggcggt
atgccaatgggaccgcaaattgtgtcattgcgctacggtgcaaatgtggtggttggcacc
cctggccgcattatggaccatataggtaagcgcacattaagtttaaaaaaagtgaattgc
tttgtgcttgatgaagctgatcgcatgctcgatatgggctttgaagatgagatgcgggtg
gtgatgcaccatctttcgcaaactgccttggcgtcgacacgacaaactttgttattttca
gctactttcccagatcaaatcaaaagtattacggatcagtatcagcgcaatgcaaagatc
attaaagttgaagacgggcagtctgcgccgaatatcgaacaacaggcttatcgtataagt
aatgagcaccggactcaggccgttgcagcattgcttacacatcatcaaattgaatcaacg
attgtgttttgccgcactcgacgcgaaaccaaagaactcagcgatgaattatatcaaatg
ggctttactgctgtagggttgcacggtgatctagaacagtcggagcgcagtcaagtactt
gctcgatttgcgaataaaacggtgagcgtgttagttgcaactgacgttgctgcgcgcggg
cttgatatagagcgcgtcgatttagtcattaatcacagggttagtgaagatatcgatact
cacacacatcgaattggacgcacaggccgagcagaagaaaaaggcttagcaatcacctta
atcgatgataacgaagaaggtaagctagacgaaatagcggcaaaaacagatgctaaaatt
agtaaactccatattcaaggtgtgcgctttcatgcaaaccgtataagagagcctgagttt
gtttgtattgcagttgatggtggtaaacgagataagctgcgtccaggggatattttggga
gcattaaccaaagaggccgagataccgggagaggatataggaaagatttctatttccgct
cggcatacttacattgccataaaagccagaagcgtgaaacgcgcattaagccagtttcgt
gagcgtcgtatcaaaggaaagcgctttaaagcaagaaagctctag
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