Brumicola nitratireducens: GNIT_3439
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Entry
GNIT_3439 CDS
T01632
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gni
Brumicola nitratireducens
Pathway
gni03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GNIT_3439 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gni03019
]
GNIT_3439 (groEL)
03110 Chaperones and folding catalysts [BR:
gni03110
]
GNIT_3439 (groEL)
03029 Mitochondrial biogenesis [BR:
gni03029
]
GNIT_3439 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gni04147
]
GNIT_3439 (groEL)
Enzymes [BR:
gni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GNIT_3439 (groEL)
Messenger RNA biogenesis [BR:
gni03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GNIT_3439 (groEL)
Chaperones and folding catalysts [BR:
gni03110
]
Heat shock proteins
HSP60 / Chaperonin
GNIT_3439 (groEL)
Mitochondrial biogenesis [BR:
gni03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GNIT_3439 (groEL)
Exosome [BR:
gni04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GNIT_3439 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
GNIT_3439 (groEL)
Exosomal proteins of breast cancer cells
GNIT_3439 (groEL)
Exosomal proteins of colorectal cancer cells
GNIT_3439 (groEL)
Exosomal proteins of bladder cancer cells
GNIT_3439 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEP31533
UniProt:
G4QNB4
LinkDB
All DBs
Position
complement(3865697..3867334)
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKEVRFGIDARNKMLNGVNILANAVKVTLGPKGRNVILEKSFGSPTITKDGVSVAKEI
ELEDRFENMGAQMVKEVASKANDEAGDGTTTATVLAQAIVVEGLKSVAAGMNPMDLKRGI
DKAVIAAVAELKKLSTECADSKAIAQVGTISANSDEIVGQIIAEAMEKVGKEGVITVEEG
QALHNELDVVEGMQFDRGYLSPYFMNNQENGTVELDAPYILLVDKKVTNIRELLPTLEAV
AKASKPLLLIAEDVEGEALATLVVNNMRGIVKIAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGLELEKVQLEDLGTAKRVVITKDNTTIVDGAGDQESIEGRCNQIRAQIEDSSSDY
DKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RAAAALVNLTGDNEDQTLGIKLALRAMEAPLRQIASNAGAEASVVTNAVKNGEGNFGYNA
ANDTYGDMLEMGILDPTKVARSALQFAASIASLMITTEAMVAEAPKEDAPAMPDMGGMGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagaagtacgtttcggtattgatgctcgcaataaaatgctaaatggcgta
aacattctagcaaatgcagttaaagttactttaggcccaaaaggtcgtaacgttatttta
gaaaagtcttttggttctccaaccattactaaagatggtgtgtcagttgcgaaagaaatc
gaattagaagatagattcgaaaacatgggcgcacagatggtaaaagaagttgcgtctaaa
gcaaatgacgaagctggtgacggcacaacaacagccactgttttagcgcaagctatcgta
gtagaaggtttgaaatcagttgctgctggtatgaacccaatggatcttaagcgcggcatc
gacaaagcggttatcgcagctgttgcagagctcaaaaagctttctacagaatgtgctgac
agtaaagcaattgcacaagtaggtactatttctgctaactctgacgaaattgttggtcaa
atcattgctgaagcaatggaaaaagtcggcaaagaaggcgttattaccgttgaagaaggc
caagcacttcataacgaattagacgttgttgaaggtatgcagtttgaccgcggttacctc
tctccttacttcatgaacaaccaagagaacggtacggtagaacttgatgcaccgtatatt
ctattagtagacaaaaaagtcaccaacattcgtgagttgttgcctacgcttgaagctgta
gcgaaagcatctaagccattgcttctgattgctgaagacgttgaaggcgaagcgctagca
actttagttgttaacaacatgcgcggaatcgttaaaattgctgctgttaaggcacctggc
tttggcgaccgtcgtaaagcaatgctgcaagacatcgctacactaactggcggtacggtt
atttctgaagaaatcggcttagagcttgaaaaagttcagcttgaagacttaggtacagca
aaacgtgttgtgatcactaaagataatacaacgattgttgacggtgctggcgatcaagaa
agcatcgaaggtcgttgtaaccaaattcgtgcacaaattgaagattcgtcttcagactac
gacaaagaaaagcttcaagagcgtttagctaaattagcaggcggtgttgcggtaattaaa
gtaggtgcagcgactgaagttgaaatgaaagagaaaaaagcacgcgttgaagatgcactt
catgcaacacgcgcagccgtagaagaaggtgttgtgcctggtggtggtgttgcattagtt
cgtgctgcagctgcgttggttaatctaactggcgataacgaagaccaaaccttaggtatt
aaactcgcactacgtgcgatggaagctcctttacgtcaaatcgcatctaacgctggtgct
gaagcttctgttgttactaatgctgttaaaaatggtgaaggtaacttcggttacaacgct
gcaaatgacacatacggtgacatgctagagatgggtattcttgacccaactaaagtagct
cgttctgcattacagtttgcagcatcaattgctagcttaatgatcacaaccgaagcaatg
gttgctgaagcgccgaaagaagatgctcctgctatgcctgatatgggcggtatgggtgga
atgggcggcatgatgtaa
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