Brumicola nitratireducens: GNIT_3639
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Entry
GNIT_3639 CDS
T01632
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gni
Brumicola nitratireducens
Pathway
gni03030
DNA replication
gni03430
Mismatch repair
gni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GNIT_3639
03430 Mismatch repair
GNIT_3639
03440 Homologous recombination
GNIT_3639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gni03032
]
GNIT_3639
03400 DNA repair and recombination proteins [BR:
gni03400
]
GNIT_3639
Enzymes [BR:
gni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GNIT_3639
DNA replication proteins [BR:
gni03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GNIT_3639
DNA repair and recombination proteins [BR:
gni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GNIT_3639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
VRR_NUC
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AEP31733
UniProt:
G4QP25
LinkDB
All DBs
Position
4064259..4066400
Genome browser
AA seq
713 aa
AA seq
DB search
MRFINRKSIFVKPASYIYEEIENIADNFDFLFHAEWFSPLKPKNAAAFVEHLTKDEIIQI
IDDVKAHSNASSNQLVYKKSQAKAALIDCLLTGASSKDIVKTELAKSYWQGSFDKHISYF
LYLYFGNFHSKLNQFSMRDLGVMRTRKEQAQVMARFADIESAKSAFSLHSLLNEIRIQLP
LLSSAANVVEEPTPVVVEEQIIQAYSSSGTALNPDNGQSEKHVFILSHISNLPEAIGAKA
LDLDAKLQFLLASELLSLDAAYAVQLLKSINTDAAQEKWVREAYKLGLTEQVETELERII
QSPLSEDLLAFAEDFLARKYHKKRTSVLTDMLRENSQTIQIDEMHKGAVERGVVAYYEQR
ECRAFRTENEIWRALFGLYFWREIYELDGLGLSNEFEHVPTSLKTNQFYEFASEQIEARL
STTDTKATLIQQLSMSAAKYYGQGNIVFRWRKNILERLILLINHSKLDAMLALLKAMTQD
WKNLSDGFPDLMLIENDKLRFEEVKSEGDQLRRNQLLSIQKLQSLGFDVRITNVTWTIDP
LQPYAVIDIETTGGRAQHHRITEVGIVKMIGGEVVAEWQSLINPERRIPHNITSLTGIDN
DMVADAPLFAEVADDIDEFTDGCVFVAHNVNFDYGFIKEEFNRLERHYRRPKLCTVREMR
KHYKGLSSYSLANLTKHFGIDMQRHHRAMSDAVAAGELLNMVNEKRLAKDNER
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcttcattaatcgcaagtcaattttcgttaaacccgcttcttatatttatgaagaa
attgaaaacatcgctgataatttcgattttctatttcacgcagaatggttttcccccctc
aaaccaaaaaacgcggctgcatttgttgagcacctgacaaaagacgagatcattcaaata
atcgatgatgtaaaggcgcacagcaacgccagttctaatcagttggtttacaagaaatca
caagcaaaagcagcgctaattgactgccttttaactggggctagcagcaaagacatcgtc
aaaactgagcttgcaaaaagctattggcaaggaagttttgataaacacatcagctatttc
ctgtatttatattttggcaattttcactcaaaattgaatcaattttcgatgcgcgatctt
ggtgtaatgcgcacacgcaaagaacaagctcaagtcatggctagatttgcagacatagaa
agcgctaaatcagcattttctctgcactctctgctcaatgaaatacgcattcaacttcct
ttgttaagcagcgctgcaaatgtagtggaagagccaacgcctgtggtcgttgaagagcaa
ataatacaggcatattcctcttcaggcactgcactcaatcctgacaatggacaatccgaa
aaacacgttttcatattgtcccacataagcaatctgcctgaggcaattggagccaaagcg
cttgatttagacgcaaaactacagtttttattagcaagtgaactgctgagcctcgacgca
gcctatgctgttcaacttttaaaatccataaacactgacgccgcacaagaaaaatgggta
cgagaagcctacaaacttggcttaacagaacaggtagagactgaactagagcgcattata
cagtcccctctatcagaagatttattggctttcgctgaagactttttagcacgtaaatat
cacaaaaaacgcacgagtgtgttaaccgatatgctgcgtgaaaacagccaaactatccaa
atcgatgaaatgcacaagggcgctgtcgaacgcggtgtagtagcttattatgagcagcga
gaatgccgtgcatttcgaaccgaaaacgaaatttggcgagcacttttcggactgtacttt
tggcgtgaaatctatgagctagatggcctaggactcagcaacgagtttgagcatgttcca
acatctctaaaaaccaaccagttctatgagttcgcttcagagcaaattgaagctcgctta
agcactacggatacaaaggcgactctaattcagcagctatctatgtccgcagccaagtac
tacggccaaggcaatattgtttttagatggcgaaagaacatattagaacgccttatactc
ttgattaatcatagtaagctcgatgccatgttggctttattgaaagcgatgacacaagac
tggaaaaatttaagcgacggatttccagacctaatgctgattgaaaacgataaactgcgt
tttgaagaggtgaaatctgaaggtgatcaacttcgacgcaatcagttgctcagcattcaa
aagctgcaaagcttgggttttgatgtgcgaattaccaatgtaacttggactatcgaccct
cttcagccatacgctgtgattgatattgaaaccaccggcgggcgagcacaacatcatcgt
attacagaagtaggaatagttaaaatgatcggcggcgaagttgttgccgaatggcaatcg
ctaattaatcctgagcgacgcattccgcataatattacctcattaacgggtatcgacaac
gacatggttgccgatgcgccactgtttgcggaagtggccgatgatatcgatgaattcacc
gatggctgtgtattcgtggcacacaacgttaatttcgattacggctttatcaaagaggaa
tttaaccgactagagcgacactatcgccgaccaaagctgtgtacggtaagagaaatgcgc
aagcactacaaaggcttatcttcgtattcgttggccaaccttaccaagcattttggcatt
gatatgcagcgccatcacagagcaatgtcggatgccgtggccgctggtgagctgctaaat
atggtaaatgaaaaacgattagcaaaagacaatgaacgctga
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