Geomonas nitrogeniifigens: KP003_00095
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Entry
KP003_00095 CDS
T07937
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
gnt
Geomonas nitrogeniifigens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA
AAA_16
ATPase
bpMoxR
AAA_30
MCM
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QXE86848
LinkDB
All DBs
Position
27453..28823
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AA seq
456 aa
AA seq
DB search
MRRAKIMVVDDEHLIRWSLEQNLKKQGYEVCTAGTGEDALRIAREEQPELVLLDYHLPGI
NGLEVLQRLKEIDEEILVIMVTAQGGLETAVNTMRHGAYDYINKPFNLDEMALVVRKALE
TSELRREVVQLRSEHKKQGPPKILGSSKHMKNVLEMMAKVAKSDATTVLVQGESGTGKEL
VAKYIHYESARADKPFVAINCAAVPSTLLESELFGHEKGAFTDAKTSKKGLFELADGGTV
FLDEIGDMEIGMQAKLLRFLEDRTFRRIGGAKVIPVDVRIISATNKDLIKAIEDKSFRND
LYYRLQVIPIFLPALRERKEDILVLANHFIEVFSREFNKPTKGISSMAEKLLVEYNWPGN
IRELKNVIERAIILGNDENLLLENLPLEIVAKASQATVPLTTFKLPPEGIDIEEVERELI
KQSLEMTDWNQSKAAKKLNLGIDAFRYRMKKFGFLK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagagcaaaaataatggtcgtcgacgatgagcacctgatccgctggtccctggag
cagaacctcaagaagcaggggtacgaggtatgcaccgccgggaccggcgaggacgcgctc
aggatcgcccgggaagagcagcccgaactggtgctgctggactaccatctccccggcatc
aacggccttgaggttttgcagcgactcaaggagatcgacgaagagatcctggtgatcatg
gtgaccgcccagggaggcctggagactgcggtgaacaccatgcgccacggggcctacgac
tacatcaacaagcccttcaacctggacgagatggcgctggtggtcaggaaggccctggag
acctccgagctgcgccgcgaggtggtgcagcttcgcagcgagcacaagaagcagggaccg
cccaagatcctggggagctccaagcacatgaaaaacgtgctggagatgatggccaaggtg
gccaagagcgacgccacaaccgtcctggtgcagggggagtcgggtaccggcaaggaactg
gtggcgaagtacatccactacgaatccgcccgtgccgacaagcctttcgtcgccatcaac
tgcgccgccgttccctccaccctcttggagagcgagctcttcggtcacgagaagggggcc
ttcaccgacgccaagacctccaagaaggggctcttcgagttggccgacggcggcaccgtg
ttcctggacgaaatcggggacatggagatcggcatgcaggccaagctgctgcgtttcctc
gaggaccgcaccttccgtcgcatcggcggcgccaaggtgatccccgtcgacgtcaggatc
atctccgcgaccaacaaggacctgattaaggcgatcgaggacaagtccttcagaaacgac
ctgtactaccggctccaggtcatcccgatcttcctccccgccctgcgagagcgcaaggag
gacatcctggtgctggccaaccacttcatcgaggtcttctcgagggagttcaacaagccg
accaaggggatctccagcatggcggagaagctcctggtcgagtacaactggcccggcaac
atccgcgagctcaagaacgtcatcgagcgcgccatcatcctgggcaacgacgaaaacctg
cttctcgagaacctgccgctcgagatcgtggccaaggcctcgcaggccaccgtgccgctc
accaccttcaagctcccccccgaggggatcgacatcgaggaggtggagcgcgagctgatc
aagcagtccctggagatgaccgactggaaccagtccaaggccgccaagaagctgaacctc
ggcatcgatgcgttccgctaccgcatgaagaaattcggtttcctgaagtag
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