Geomonas diazotrophica: KP003_00460
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Entry
KP003_00460 CDS
T07937
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
gnt
Geomonas diazotrophica
Pathway
gnt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KP003_00460 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gnt03400
]
KP003_00460 (recC)
Enzymes [BR:
gnt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KP003_00460 (recC)
DNA repair and recombination proteins [BR:
gnt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KP003_00460 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QXE86914
LinkDB
All DBs
Position
complement(115601..118819)
Genome browser
AA seq
1072 aa
AA seq
DB search
MPLYIHTSNQMEHLVDRLEKVVRAPRRAPCTPFDKELIVVQSKGMQRWLSMELAARIGVW
ANGEFLFPNRFVEQVFAKVLPDAPEQAPLFSPEVMTWRILGLLQQAGGKPGFEEIAGYLS
DDADGLKRMQLAQRVADTFDRYTVYRPEKLMEWEQGKEEHWQAQLWRALSGDVSQKHRAR
LLHEFRKALAGGRLPDQRRISVIGIPSLPPFHLEVLARLARHAEVNLFLLNPCRQYWGEI
VSERELARLEKQGEGAEQWYETGNPLLASWGKLGRDFFAAIIDGCGEHDRQDSFSELPQG
SLLHEVQADIVELRGADAGVREVEAGDLSLEVHSCHSPMREVEVLYDTLLSIFDADPSLS
PRDVLVMTPDIESYAPYISAVFGNPETGAERIPYSIADRSLKNEGEGAQALLAILGLCGG
RYGVATVLDILESAPVARRFGLNEDDLETVRDWLRGANIRWGIDAAQRAEHGVPPFHENS
WSAGLDRLLLGYAMNGDGRSFYNEILPFDDMEGGVALVLGRFLSFCEKLFAETQGLSRPR
RVAEWVPVLRRILDDFILPDQEGERELLSLIEIVKKLGECGSQAGFEEEIGIEVVRYWVE
QQLGSSERGLGFLTGGVTFCAMLPMRSIPFPVVALIGMDEGQFPRKNPAQGFDLMTREHR
PGDRSPRDEDRYLFLEALLSARKRLHISYVGQGIKDNAELPPCVLVSELQDYLGRCFVTS
EGKPAGKSRRHPLQPFSPRYFTGDNGHFSYSQQNCAGAAAKLLPPAPPVPFLATPLPPWE
ESSTVTLKSLVDFLCNPSKELLRRRLGVRIVEGDDPLEEVEPFALGSLEKYQLEQEIVAA
VLRGEGLEVPLTVACARGDLPPGVCGAALYQKLGEPAAEFAAKVSEMAAGEPLPPLDIDL
RLPAGRIIGRLENLGSDRMVRYRYTDLKPKDQLRLWVEHLALNCVQAEGYPLQSTFVAAK
STVNLPAIDDSEGHLNRLLELYQQGMSHPLKFFPETSFEYVKNAREPKNAAKALGAAAAA
WQGSEYKKGDVKDEYCRRCFGEVPPLDEEFQALARAVWDPILDNLVKSGRKK
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgtacatccacaccagcaaccagatggagcacctggtggaccgcctggagaag
gtggtccgcgcgccgcgtcgcgcgccctgcaccccgttcgacaaggaactgatcgtggtg
caaagcaagggtatgcagcgctggctttccatggagctggcggcgcggatcggcgtctgg
gccaacggggagttcctcttccccaaccgcttcgtggagcaggtcttcgccaaggtgctc
ccggacgcgccggagcaggcccccctgttctcacccgaggtgatgacctggagaatcctg
gggctcttgcagcaggcggggggaaagcccggtttcgaggagatcgcgggatacctctcg
gacgacgcggacgggctgaagcggatgcagcttgcccagcgcgtcgcggacaccttcgac
cgctacaccgtctaccgccccgaaaagctcatggagtgggagcagggaaaggaagagcat
tggcaggcgcagctctggcgcgccctcagcggggacgtctcgcagaagcaccgcgcccgc
ctgctgcacgagttccgcaaggcgctggccggcggccggctccccgaccagcgccgcatc
tccgtgatcggcatcccgtcgcttccgccgttccatctcgaggtcctggcccgcctcgcc
cggcacgccgaggtaaacctgttcctgctgaacccatgccgccagtactggggcgagatc
gtctccgagcgcgagctggcacggctcgagaagcagggagaaggcgcggagcagtggtac
gagacggggaatcccctgctcgcctcctgggggaagctcggacgcgacttcttcgcagcc
atcatcgacggctgcggcgagcacgacaggcaggacagcttctcggagctcccgcagggt
tcgctgctgcacgaggtccaggccgatatcgtggagctgcgcggcgccgacgcgggcgtg
cgcgaggtcgaggcgggcgacctctccctcgaggtgcactcctgccactcacccatgcgg
gaagtcgaggtgctctacgataccctcctctccatcttcgacgcagacccgtcgctctcc
ccccgagacgtgctggtgatgaccccggacatcgaaagctacgccccctacatctccgcc
gtcttcggcaaccccgagaccggcgccgagcgcatcccctactccatcgcggaccgcagc
ctcaaaaacgagggggagggggcccaggcgctgctcgccatcctcgggctgtgcggcggc
cgctacggggtggccaccgtgctggacatcctggaatcggcgccggtggcgcgccgcttc
gggctcaacgaggacgacctggagacggtgcgcgactggctcaggggggccaacatcagg
tgggggatcgacgccgcccagcgcgccgagcatggcgtcccccctttccacgagaactcc
tggtcggccgggctggaccggctgctcctgggttacgcgatgaacggcgacggccgctcc
ttctacaacgagattctcccgttcgacgacatggaggggggcgtggcgctggtgttggga
cgcttcctctccttctgcgaaaaactctttgccgagacgcagggactctcccgccccagg
cgggttgcggagtgggtgccggtgctgcgccggatcctggacgacttcatcctgccggac
caggagggggagcgcgaactcctctccctgatagagatcgtgaagaaactcggagagtgc
ggcagccaggccggtttcgaggaagaaatcggcatcgaggtggtgcgctactgggtggaa
cagcaactggggagctcggagcggggtctcggcttcctgaccggcggggtcaccttctgc
gccatgctcccgatgcggagcatcccgttcccggtagtcgccctgatcggcatggacgag
gggcagttcccgcgcaagaaccccgcccaggggttcgacctgatgaccagggagcaccgc
cccggtgaccgctcgccgcgcgacgaggaccggtacctgttcctggaggcgctcctctcc
gcccggaagcggctgcacataagctacgtgggacagggcatcaaggacaacgcggaactc
cccccctgcgtgctggtcagcgagttgcaggactacctggggaggtgcttcgtaacctcc
gaggggaaacccgcggggaagtcgcggcgccacccgctgcagcccttcagccccaggtac
tttaccggcgacaacgggcatttcagctattcccagcagaactgcgccggcgccgcggcg
aagctcctgccccccgccccccccgtgccgttcctggccacccccctccccccgtgggag
gagtcgtcgacggtgaccctgaagtccctggtggatttcctgtgcaacccgtccaaggag
ctgttgcggcgcaggctgggggtccgcatagtggaaggggatgacccgctggaagaggtg
gaaccgttcgcgctgggatccctggagaagtaccagctggagcaggaaatcgtggcggcg
gtgctgcgcggggaggggctggaagtccccttgaccgtagcctgcgcccgcggcgatctc
ccccccggtgtctgcggcgccgcgctttaccagaagctgggcgagccggcggcggaattc
gcggcgaaggtgagcgagatggccgccggggagccgctccctcccctggacatcgacctg
aggctccctgccgggcgcatcatcgggcggctcgaaaacctggggagcgaccggatggtg
cgctaccgctacaccgacctgaagccgaaggaccaactgcggctctgggtcgagcacctg
gcgctcaactgcgtacaggccgaagggtacccgttgcagagcaccttcgtcgccgcgaag
agcaccgtcaacctccccgccatcgacgacagcgaagggcacctgaaccggctcctggag
ctctaccaacaggggatgagtcacccgctcaagttcttcccggagacctcgttcgagtac
gtgaaaaacgcccgcgaaccgaaaaacgccgccaaggctctcggcgccgccgctgcggcc
tggcagggcagcgagtacaagaagggagacgtcaaggacgagtactgccgccgctgcttc
ggcgaggttcccccgcttgacgaggagttccaggccttggcccgcgcggtttgggaccct
atcctggacaacctggtgaagagcggcaggaagaagtaa
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