Geomonas nitrogeniifigens: KP003_00520
Help
Entry
KP003_00520 CDS
T07937
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
gnt
Geomonas nitrogeniifigens
Pathway
gnt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KP003_00520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gnt03400
]
KP003_00520
Enzymes [BR:
gnt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
KP003_00520
DNA repair and recombination proteins [BR:
gnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KP003_00520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QXE86926
LinkDB
All DBs
Position
complement(129372..130223)
Genome browser
AA seq
283 aa
AA seq
DB search
MDLLGAHVSISGGIHNAVDRGVASGCGVIQLFTQNANQWRGKAVSDADAQLFRDKFAASG
MKSVMSHDIYLINLAAAPGEVKDKSLVAFREELERCAKLGIDKVVMHPGSHNGDGEEVGI
RRVCEAFDQLFAEVPQFTGKVLLENTAGQGSNLGYKFEHLKAIVGGCSDPTRFGVCFDTC
HAFASGYAIADREGYRRTFDEFDALLGIDRLMAFHLNDSKKGLGCRVDRHDHIGAGTLGL
EPFRFILNDPHFALVPKVIETPKGDDDEMDAVNLKLLRSLIES
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggacctattgggcgctcacgtctccatctcgggcggcatccacaacgccgtcgaccgc
ggggtcgcctccggctgcggcgtgatccagctcttcacccagaacgccaaccagtggcgc
ggcaaggccgtctccgacgccgacgcccagctcttccgggacaagttcgctgccagcggc
atgaaaagcgtcatgagccacgacatctacctgatcaacctggccgcggcacccggcgag
gtgaaagacaagagcctcgtcgccttccgggaggagctggagcgctgcgccaagctcggc
atcgacaaggtggtcatgcaccccggctcgcacaacggcgacggcgaggaggtcggcatc
agacgcgtctgcgaggccttcgaccagctcttcgccgaggtgccgcagttcaccggcaag
gtactcttggagaacaccgcgggccaggggagcaacctgggctacaagttcgaacacctg
aaggcgatcgtggggggctgttccgacccgacccgtttcggcgtctgcttcgacacctgc
cacgccttcgcctcgggctacgccatcgccgacagggaaggttatcgcaggacctttgac
gagttcgacgccctgctcggcatcgaccggctgatggccttccacctgaacgactccaag
aaggggctggggtgcagggtggaccgtcacgaccacatcggcgccgggacgctcggcctc
gagcccttccgcttcatcctgaacgacccgcacttcgccctggtcccgaaggtgatcgaa
accccgaagggggatgacgacgagatggacgcggtgaacctgaaacttttgcggagcctg
atcgaaagctga
DBGET
integrated database retrieval system
