Geomonas nitrogeniifigens: KP003_00780
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Entry
KP003_00780 CDS
T07937
Name
(GenBank) outer membrane beta-barrel domain-containing protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
gnt
Geomonas nitrogeniifigens
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gnt02000
]
KP003_00780
Transporters [BR:
gnt02000
]
Other transporters
Pores ion channels [TC:
1
]
KP003_00780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
OprF
DEC-1_N
OmpA_membrane
Motif
Other DBs
NCBI-ProteinID:
QXE86976
LinkDB
All DBs
Position
178728..180119
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AA seq
463 aa
AA seq
DB search
MKKYLLLLVLVPALLFTLCPKARAEIKAQSFSLSPFVGGYTFIGKEHLETAPVFGLRGGY
NFTQHFGLEAVFDYVPTEGKSHSNIGDVDAYNYHLDMLYHFMPDRQLVPYVAAGFGGQSR
EAAGEHETSRAAFNYGAGLKYFLTDALALRGDLRHLILREDGESYHNLEYTVGVDFMFGG
VKQAPAVAAKPAPEPEPVAQPAPAEEPPLEPVPAAEPTPGHYKYCVTLHGEFDIGKAAIR
QEDKDQIGVVCDFMKQYPTTTAVIEGHTDNVGAPEYNLDLSKRRAQAVVDYMVANCGIDR
SRLEARGFGMARPVASNATDEGRQANRRIEAIIDCAFDVKEVKPPERLCMALVVEFDTGK
ANIKPQYKDEMARVADYMKKYPTTTAIIEGHTDNVGGFEYNMKLSRERAESAVQYLVDNF
GIEKSRLTAKGYGYTRRIAYNSTAEGRAKNRRINAIIDCVIKK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtacctgctgttgcttgttctggttcccgcattgttgttcaccctgtgcccg
aaggcgcgcgccgaaataaaggcgcaaagcttctccctctcaccctttgtcggcggctac
accttcatcggcaaagaacacctggagaccgcacctgtctttggcttgcgcggcggctac
aacttcacccagcacttcggcctcgaggcggtgttcgactacgtccccaccgaagggaag
agccacagcaacatcggcgacgtcgacgcgtacaactaccatctcgacatgctctatcac
ttcatgccggaccggcagttggtcccctacgtcgctgccggctttggcgggcagtcccgc
gaagccgcgggggaacacgagaccagtcgggcggctttcaattacggcgccggcctcaag
tacttcctcaccgatgcgctggcccttcgcggcgacctgcggcacctgatcctcagggag
gacggcgagtcctaccacaacctggagtacaccgtcggggttgatttcatgttcggcggc
gtgaagcaggcgcctgcggtcgcggccaagccggcgcccgaaccggagccggtagcgcag
ccggcccccgcagaagagccgccgctggagccggtacccgcggccgaaccgaccccgggg
cactacaagtactgcgtcaccctgcacggcgagttcgacataggcaaggccgccatccgc
caggaggacaaggaccagatcggcgtcgtctgcgacttcatgaaacagtatccgaccacc
acggccgtcatcgaggggcacaccgacaacgtgggcgcccccgagtacaacctcgacctc
tccaagcggcgtgcacaggccgtcgtcgactacatggtggccaactgcggcatcgaccgc
tcccgtctcgaggcccgcggcttcggcatggcgcgcccggtggcatccaacgccaccgac
gaagggcggcaggcgaaccgccgcatcgaggctattatcgactgtgccttcgacgtgaag
gaggtcaagcctcccgagcgtctctgcatggccctggtggtcgagttcgataccggcaag
gcgaacatcaagccccagtacaaggatgaaatggcgagggttgccgattacatgaagaag
tacccgaccaccaccgcgatcatcgaagggcataccgataacgtcggcgggttcgagtac
aacatgaagttatcgcgggaacgtgccgagagcgcggtgcagtacctggtcgacaacttc
ggcatcgagaagagccgcctgaccgccaaggggtacggctacaccaggcgcatcgcttac
aacagcaccgccgaggggcgcgccaagaaccgcaggatcaacgccatcatcgactgcgtg
atcaagaagtag
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