Geomonas nitrogeniifigens: KP003_00925
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Entry
KP003_00925 CDS
T07937
Symbol
cobA
Name
(GenBank) uroporphyrinogen-III C-methyltransferase
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
gnt
Geomonas nitrogeniifigens
Pathway
gnt00860
Porphyrin metabolism
gnt01100
Metabolic pathways
gnt01110
Biosynthesis of secondary metabolites
gnt01120
Microbial metabolism in diverse environments
gnt01240
Biosynthesis of cofactors
Module
gnt_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
KP003_00925 (cobA)
Enzymes [BR:
gnt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
KP003_00925 (cobA)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
KP003_00925 (cobA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
QXE87005
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Position
204877..206427
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AA seq
516 aa
AA seq
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MTAETTKKGYVYLIGAGPGDPGLITVKGRDCLAKAQVVMYDYLANDELLRLAPKGAELIY
AGKVGGEHNREQSQINDLLVQKALSGKVVARLKGGDSFIFGRGGEECEALVAQGIPFEIV
PGITAAVGATSYAGIPLTHRGVTTSVAFVTGHEKKGKASSEIDWEGLSLGSGTVVFYMGV
TNLPHIARSLMDHGRAPETPVALIRWGTRPEQEVLVGTLADIAEKARTAGFKAPAITVVG
EVVNLRETLRWFDNRPLFGNSVLVTRGADQAGEFTSMLEQLGARAYCCPTIEIAPPESYA
ALDEAIDALDSFHWVVFTSYNAVKYFFARLAKHGLDSRALGRCRVCAVGPKTAAALAPYG
IRPDLIPADYKAEGVVAAFSELDMNGKWVLFPKGDRAREVIPEELGHLGAQVIAPVTYAN
HTPTSIPEEALQALEEKRVDCATFTSSSTVHNLARILGENRFLHLMEGVKVASIGPITSK
TCRDLGLEVHMEPAEFTLEALSREMIRFFGSASSRS
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgaaacgacaaagaaaggctacgtctacctgatcggcgcgggtcccggtgat
cccgggctgatcacggtgaagggacgggactgcctggccaaagcgcaggtggtgatgtac
gactatctggccaacgacgagctgctgcggctcgctcccaagggggcggagctgatctac
gccggcaaggtaggcggcgaacacaaccgcgagcagagccagatcaacgacctgctggtg
caaaaggccctctccggcaaggtggtggcgcggctcaaggggggagactccttcatcttc
ggccgcggcggcgaggagtgcgaggcgctggtcgcgcaggggatccccttcgagatcgtg
ccgggcatcaccgcggcggtcggcgccaccagctacgcggggatcccgcttacccaccgc
ggcgtgaccacctcggtcgccttcgtaaccgggcatgagaagaaagggaaggcctcctcg
gagatcgactgggaaggactctcgctggggagcggcaccgtggtcttctacatgggcgtc
accaacctgccgcacatcgcgcggagcctcatggatcatggacgggcgccggaaacgccg
gtggcgctgatccgctgggggacgcgcccggagcaggaggtgctggtcggcacgttggcc
gacatcgcggaaaaggcgcggaccgcgggcttcaaggctcccgccatcaccgtggtcggc
gaagtggtgaacctccgtgaaacgctgcgctggttcgacaaccgcccgctcttcgggaac
tcggtcctggtcacccgcggcgccgaccaggccggagaattcacctcgatgctggagcag
ttgggagcccgcgcctactgctgcccgaccatcgagatcgcgccgccggagagctacgcc
gctctcgacgaggccatcgacgcactggacagcttccactgggtcgtcttcacctcttac
aacgcggtcaaatacttcttcgccaggctcgcgaagcacggcctcgacagtcgggccctc
ggtcgctgccgcgtctgcgccgtcggcccgaagaccgccgcggcgcttgctccctacggg
atccggcccgacctcatccccgccgactacaaggccgagggggtagtcgccgctttctcc
gagctggacatgaacggcaagtgggtgctcttcccgaaaggggaccgcgcccgcgaagtg
attccggaggaactgggacacctgggggcacaggtgatcgccccggtgacctacgccaac
cacacccctacgagcatcccggaagaggcgttgcaggccctggaggagaagcgcgtcgac
tgcgccaccttcacctcctcgtccacggtccacaacctcgcccgcatcctcggggaaaac
aggttcctgcatctcatggaaggggtgaaggtggcctcgataggtccgatcacctccaag
acctgtcgggatctcgggctggaggtgcacatggagcccgccgagttcacccttgaggcc
ctgtcgcgggagatgattcgctttttcgggagcgcatcttctcgcagttaa
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