Geomonas diazotrophica: KP003_00945
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Entry
KP003_00945 CDS
T07937
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
gnt
Geomonas diazotrophica
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gnt03016
]
KP003_00945
Enzymes [BR:
gnt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
KP003_00945
Transfer RNA biogenesis [BR:
gnt03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
KP003_00945
Prokaryotic type
KP003_00945
SSDB
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Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_3
Motif
Other DBs
NCBI-ProteinID:
QXE87009
LinkDB
All DBs
Position
209278..210357
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AA seq
359 aa
AA seq
DB search
MPKPFRYLEPTFFAGLFDDPLLLVRVRPTGRAILFDCGKMHHLAKRVYTSIDAIFISHAH
MDHFMGMDSVIRHSHASPRTIDVFGPPGLSRRMASKFACYDWNLADTFWGNFRVNEVGAG
GRVASTLYSGPEAFLATPEGERNGVLYGNRHLTVTGTHCEHHIPVVAYRVDEGAAFLLDD
ERMAAAGVKKGAWLKEMERLFRDGVLEGSPVRYPCESGGSLEERVEPDAGLLYQRIRKFE
EPASIGYVTDIGYSEENVAKLAGLLEGVTLLVCECAFLASESKKAGVSRHLCTTQFNMLL
ERLRPRYVLPMHFSKTYQRGSGPLYAEIEPPSGVTVLKVPDRLTPRPIMESEVPRPVEI
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacctttccgctatctcgagcctaccttcttcgcggggctgttcgacgacccg
ctgctcctggtccgtgtgcgtcccaccggtcgcgcgatccttttcgactgcggcaagatg
catcaccttgccaagagggtctatacctccatagatgccatcttcatcagccacgcccac
atggaccacttcatggggatggacagcgtcattcgtcacagccatgcctcgccgcgcacc
atcgacgtcttcggccctcccggtctctccaggcgtatggccagcaagttcgcctgctac
gactggaacctcgccgacaccttctggggaaatttcagggtcaacgaggtgggcgccggc
gggcgggtcgcgagcacgctctacagcggcccggaagcgttccttgccacccccgaaggg
gagcgcaacggcgtcctctacggcaaccggcaccttaccgtgaccggaacgcattgcgag
caccacatcccggtcgtggcctatcgggtagacgagggagcggccttccttctcgatgac
gaacgcatggcggcggcaggggtgaagaagggggcgtggctcaaggagatggagaggctg
ttccgcgacggcgtgctggaggggagcccggtcaggtacccgtgcgaaagtggcgggagc
ctcgaggagagggtagagccggacgccggcctcttgtaccagcgcatcaggaagttcgaa
gagcccgccagcatcggttacgtcaccgatatcggctattccgaggaaaacgtcgcgaag
ctggcggggctgctggaaggggtgacgctactggtgtgcgagtgtgccttcctggcgtcc
gagtcgaaaaaggcgggggtgtcccgccatctctgcaccacgcagttcaacatgttgctg
gagcgtttgcgtccgagatacgtgttgccgatgcacttctcgaagacctaccagcggggc
agcgggccactctacgcggagatcgagccgccgtccggtgtcaccgttttgaaggtacct
gatcgtctgaccccgcgtcccataatggagagcgaggtgccgaggccggtcgagatataa
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