Geomonas diazotrophica: KP003_01310
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Entry
KP003_01310 CDS
T07937
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
gnt
Geomonas diazotrophica
Pathway
gnt00470
D-Amino acid metabolism
gnt00550
Peptidoglycan biosynthesis
gnt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KP003_01310 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KP003_01310 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gnt01011
]
KP003_01310 (murD)
Enzymes [BR:
gnt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
KP003_01310 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
gnt01011
]
Precursor biosynthesis
Amino acid ligase
KP003_01310 (murD)
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Paralog
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GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Peptidase_S32
Shikimate_DH
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
QXE87077
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Position
305485..306846
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AA seq
453 aa
AA seq
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MELKDKKILVVGLAKTGVAVTRFLAERGALVTVTDMRDEEALKDVLAELSDLDLCLELGR
HVPYSFLMADLIVVSPGVPMDIKPLEMARAQKRRVVSEVELASWFIEAPMVAITGTNGKT
TTTTLTGEIFKGCGFDTFVGGNIGNPLIELAMSGERVERVVVELSSFQLEGIESFRPHVA
VLLNLTEDHLDRYHSFQEYIDAKLRIFENQGAEDFAVLNIDDPLVAACATRLKARLFPMS
RFHELKEGISYRDGFITFAHDGKVLRFGTDGFKLKGVHNLDNIMASMASTLLMRCDGDCA
YASVKEFKGLPHRMEFVEEVNGVAYYEDSKGTNVGSVVKSLESFDSGITLIAGGKDKGGS
YEPLVQLVSDRVSHLVLIGEARERMHQALGDLTDTRFADTLEEAVDIARRVTQPGGVVLF
SPACSSFDMFKNYEERAERFKAAVRAAKEAEGK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaaggacaagaaaatactggtggtggggcttgcgaagaccggcgtggccgtg
acccgcttcctggccgagcgcggcgcgctcgtcaccgtcaccgacatgcgtgacgaggag
gccctcaaggacgtcctcgcggaactctcagacctcgacctctgcctggagctcgggcgc
cacgtcccctacagcttcctgatggccgacctgatcgtggtatcccccggcgtcccgatg
gacatcaagccgctggagatggcgcgcgcccagaagcgccgcgtggtctccgaggtggag
ctcgcctcctggttcatcgaggcccccatggtcgccatcaccggcaccaacggcaagacc
accacgaccaccctgaccggcgagatcttcaaggggtgcggcttcgacaccttcgtcggc
gggaacatcggcaaccccctcatcgagctcgccatgagcggcgagcgggtggagcgggtc
gtggtcgagctctcctccttccagctggaggggatcgagagcttccgtccccacgtcgcg
gtgcttttgaacctgaccgaagaccacctggaccgctaccacagcttccaggagtacatc
gacgccaagctgcgcatcttcgagaaccagggggcggaagacttcgcggtcctgaacatc
gacgacccgctggtggccgcctgcgccaccaggctgaaggcgcgcctcttccccatgagc
cgtttccacgagctcaaggaggggatcagctaccgcgacggcttcatcaccttcgcccac
gacggcaaggtgctccgcttcggcaccgacggtttcaagctcaaaggggtgcacaacctg
gacaacatcatggccagcatggcatccaccctgctcatgcgctgcgacggcgactgcgcc
tacgcctcggtcaaggagttcaaggggctgccgcaccgcatggagttcgtcgaggaggtg
aacggggtcgcctattacgaggacagcaaggggaccaacgtggggagcgtggtcaagtcc
ttggagagcttcgactccggcatcaccctgatcgcgggggggaaggacaagggtggctcc
tacgagccgctggtccagctcgtttccgaccgggtgagccacctggtcctgatcggcgag
gcgcgggagcgcatgcaccaggcgctgggcgatctcaccgacacccgtttcgccgacacg
ctggaggaggcggtcgacatcgcccgcagggtgacccagcccggcggcgtggtcctcttc
tcgccggcctgctccagcttcgacatgttcaagaattacgaggagcgcgccgagcgcttc
aaggcggcggtacgcgcggccaaggaggctgaaggaaagtga
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