Geomonas diazotrophica: KP003_01335
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Entry
KP003_01335 CDS
T07937
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
gnt
Geomonas diazotrophica
Pathway
gnt00470
D-Amino acid metabolism
gnt00550
Peptidoglycan biosynthesis
gnt01100
Metabolic pathways
gnt01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KP003_01335
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KP003_01335
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
KP003_01335
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gnt01011
]
KP003_01335
Enzymes [BR:
gnt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
KP003_01335
Peptidoglycan biosynthesis and degradation proteins [BR:
gnt01011
]
Precursor biosynthesis
Amino acid ligase
KP003_01335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
CPSase_L_D2
ATP-grasp_3
ATP-grasp
RimK
GARS_A
TTL
Motif
Other DBs
NCBI-ProteinID:
QXE87081
LinkDB
All DBs
Position
311539..312456
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AA seq
305 aa
AA seq
DB search
MTVAELKNKKIAVLMGGLSAEREVSLNSGKAVLASLQRQGYDAVGIDVGRDLAQRLAEEK
VELAFIALHGRFGEDGSVQGLLELMAIPYTGSGVLASALAIDKIAAKVMFAAAGLTLAPY
QVLRRGEELKLENPLPVVVKPSKEGSSVGVSIVKEPGQMEKALEEAFRYDSEILVEAFIS
GKEVQVGILDGRAMGAIEIVPKNEFYDYEAKYTDGGAEHILPARLPEQVYRAVLKEGEKA
HAALGCDCYSRVDFLVNEAGECYLLEVNTLPGMTDLSLLPEIARGSDIDFDQLVVRILLA
ASLKI
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtagcggagctgaaaaacaagaagatcgccgtgctgatggggggactttccgcc
gagcgcgaggtgtcccttaacagcggcaaggccgtgctcgcctccctgcagcgccagggg
tacgacgcggtggggatcgacgtcgggcgcgacctggcccagcggctggccgaagagaag
gtggagctcgccttcatcgccctgcacggccgcttcggcgaagacggttccgtccagggg
ctcctggagctgatggcgatcccctataccgggtccggcgttctcgcctcggccctcgcc
atcgacaagatcgccgccaaggtgatgttcgccgccgccgggctgacgctcgccccctac
caggtgctgcgccgcggcgaggagttgaagcttgagaaccccctcccggtggtggtgaag
ccctccaaggaaggctcctcggtgggggtcagtatcgtgaaagagccggggcagatggaa
aaggcgctcgaggaagccttccgttacgactcggagatcctcgtcgaagcgttcatcagc
ggcaaggaagtgcaggtaggcatcctggacgggcgtgcgatgggcgccatcgagatcgtg
ccgaaaaacgagttctacgactacgaggcgaagtacaccgacggaggtgccgagcacatc
ctccccgcccgtcttccggagcaggtgtaccgggcggtcttgaaggaaggggagaaggcg
catgccgccctgggttgcgactgttacagccgcgtcgacttcctggtgaacgaggcgggc
gagtgttacctcctcgaggtgaacaccctgccggggatgacggacctgagcctgctccct
gagatcgcccgcggttcggacatcgattttgatcaactggtggtgcgcatcctgctggcc
gcatcgctgaagatctga
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