Geomonas nitrogeniifigens: KP003_02820
Help
Entry
KP003_02820 CDS
T07937
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K19789
DNA repair protein RadD
Organism
gnt
Geomonas nitrogeniifigens
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gnt03400
]
KP003_02820
DNA repair and recombination proteins [BR:
gnt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
KP003_02820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
TPR_PEP5_VPS11
ERCC3_RAD25_C
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
QXE87357
LinkDB
All DBs
Position
644765..646594
Genome browser
AA seq
609 aa
AA seq
DB search
MKPEDLTMTLAVLDKLTNAQWQNVFNALPDRKKDIIRFSQRKSESALMAGFKRDKLYHMI
IGEYGCTLLSNSDIGSAVRIELLKSLSKANWQKVRDEYRNIFGIGALNLKVQQPNGSKIM
GNKWKSGSKWAKKFCELIGLPPSFALSYNQKFKEIETIDPVFTLKPLHNYQEEIYKELRL
LLDEGRGKARMVSIPTGAGKTRVAVDAICDHLALSMQANGKQDIVLWISNSHELLAQAWE
AFKGVWQVPPQKNGEPIRRVNPMKIIRVWQSAKHDVVLKELDPTEGDYLRSVHVLIASVD
QLHAWLKNKEEAFESLRGHLDRVCCCVVDEAHGLLTKEYSNVLTKLGLKQHKKWQTVPKA
PVVIGLTATPWKSNDDDTRSLSKYFGEKLIRPQRLNDKPIETLRNEKYLAEVTHRLLKIK
GSPALTPRQLQHINTFKDIPEDYLDILSKERARNQKILKELVSLPVSKKVLVFACSVLHA
AILTNLLNNHYKPGTAAFVYGETPRSLRISIVNQFRTGNGPRFLCNYGVLTTGFDAPKVD
VVCIARPTMSVLLYEQMAGRGLRGPKNGGTDNCIILDVNDDVFENRVQSYARVLELWDGK
EGARGAVGV
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcctgaagatttgactatgaccctagcagtactcgataagcttaccaacgctcaa
tggcaaaacgttttcaacgctttgccagataggaaaaaggatattattagattctcgcag
cgcaaatcagaaagcgcgttgatggctgggtttaaaagagacaagctctaccacatgata
ataggtgaatacggctgcactttactttcaaattcagatattggctcggctgtacgaatt
gaactattgaaatctttgtctaaagcaaattggcaaaaggtcagagacgaatatcgcaat
atctttggcataggagcgcttaacttaaaggtgcagcagcccaatggttcaaagattatg
ggcaataaatggaaatcaggttctaaatgggcaaagaagttttgcgagcttattgggctg
ccaccttcctttgcactatcatacaatcaaaaatttaaagaaattgaaacaatagacccc
gtgttcacgctgaagccactccacaattatcaggaggagatatacaaagaactcaggctg
ttattggatgaggggagaggcaaggcgcgcatggtttctatccccactggtgctgggaaa
acacgagtcgccgttgatgccatttgtgatcacctcgctttatcaatgcaggcgaacggc
aagcaggacatcgtattatggatctcaaattctcatgagttactggcgcaagcatgggaa
gctttcaaaggggtttggcaggtcccccctcaaaaaaatggtgagccgatacggcgcgtt
aacccgatgaaaattatcagggtttggcagagtgccaagcatgatgtcgtcctcaaggaa
ctcgaccctacagaaggtgattaccttcgcagcgttcacgtgctcattgcttctgtggac
cagctacacgcgtggcttaaaaataaggaagaggcttttgaaagtttacgtggccatttg
gatcgagtttgttgttgtgttgttgatgaagcacacggattgttgacgaaagagtattcg
aacgtactaacgaagctgggcctcaaacaacacaaaaaatggcagacggtaccgaaagca
ccggtagtaatagggttaacagcgaccccttggaagtcaaatgacgatgacaccagaagt
ttgagcaaatattttggcgaaaaactaatccggcctcaaaggctgaacgataaacccatt
gaaactctcagaaatgagaaatatcttgcagaagttactcaccggctacttaaaatcaag
ggttcacctgcgctgactccaaggcaattgcaacacataaatactttcaaggatattcca
gaggattacctggacatcttgagcaaagaaagagcacgcaaccagaaaattttaaaggag
ttggtaagtctcccggtttcaaaaaaagtccttgtgttcgcctgctcggtgctgcatgcc
gccatattgacgaatttgttaaacaaccattacaagccgggaacagctgcttttgtatat
ggtgagactccccgatctttgcggatatctatagtaaaccagtttagaaccggcaatggc
ccccgctttttatgcaactatggagtactgactactggattcgatgccccaaaagttgat
gttgtctgtatcgccaggccaacgatgagtgttttgctttacgagcaaatggccggtaga
ggtctgcgtggtcctaaaaatggtgggaccgataactgcataatcctcgacgttaatgac
gatgtttttgaaaaccgtgtccagagctatgcccgagtccttgagttgtgggatggtaaa
gaaggggcaaggggtgctgtaggcgtctga
DBGET
integrated database retrieval system
