Geomonas nitrogeniifigens: KP003_03120
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Entry
KP003_03120 CDS
T07937
Symbol
vsr
Name
(GenBank) DNA mismatch endonuclease Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
gnt
Geomonas nitrogeniifigens
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gnt03400
]
KP003_03120 (vsr)
DNA repair and recombination proteins [BR:
gnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
KP003_03120 (vsr)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
QXE87413
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All DBs
Position
724390..724800
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AA seq
136 aa
AA seq
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MVDIFTHEKRSMIMSKIKARDTRPERIVRSLLHRMGFRFRLHKKNMPGHPDIVLPRLKAV
ILVHGCFWHRHDKCRLAYTPKSRTEFWQTKFEKNVKRDAKVKAELEGLGWKVLVVWECEV
ADPELLGQHLTSFLGS
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atggttgatatttttacgcacgaaaagcgctcaatgatcatgtccaaaatcaaagcgcgt
gatactaggcccgaacgtatagtccgttctttgctgcaccggatggggtttcggtttagg
ttgcataaaaaaaatatgcctgggcatccggatattgttttgcctcgcttaaaagctgta
attttggtgcatggttgtttctggcatagacacgataaatgtcgtcttgcgtacacacca
aagtcaagaacggaattttggcaaacaaagttcgaaaaaaatgtcaaaagagacgccaaa
gttaaggcggaactggaagggctaggatggaaagtgctagtcgtatgggaatgcgaggtg
gcggacccagagctgcttggtcaacacttgacgagctttctaggatcataa
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