Geomonas diazotrophica: KP003_03620
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Entry
KP003_03620 CDS
T07937
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
gnt
Geomonas diazotrophica
Pathway
gnt00521
Streptomycin biosynthesis
gnt00523
Polyketide sugar unit biosynthesis
gnt00525
Acarbose and validamycin biosynthesis
gnt00541
Biosynthesis of various nucleotide sugars
gnt01100
Metabolic pathways
gnt01110
Biosynthesis of secondary metabolites
gnt01250
Biosynthesis of nucleotide sugars
Module
gnt_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KP003_03620 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KP003_03620 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
KP003_03620 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KP003_03620 (rfbB)
00525 Acarbose and validamycin biosynthesis
KP003_03620 (rfbB)
Enzymes [BR:
gnt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
KP003_03620 (rfbB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
QXE87504
LinkDB
All DBs
Position
838565..839632
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AA seq
355 aa
AA seq
DB search
MQDTFTPTSLLVTGGAGFIGSNFINHFMAGNPRCRVINLDLLTYAGNLKNLTAVEANANY
RFVKGDICDAELVARLLAEEKVDAVAHFAAESHVDRSITGPDIFVRTNVMGTQTLLEASR
LHAETLPDFRFLQVSTDEVYGSLGPEGYFTEETPLAPNSPYSASKAGADLLVRAYFETFG
LPTLNTRCSNNYGPYHFPEKLIPLMIHNILKKRSLPVYGDGLNVRDWLHVKDHSAAIERV
LKSGKPGEIFNVGGNNEWKNIDIVNLVCDLMDERLGRAPGESRELITFVKDRKGHDRRYA
IDASKLKRELSWEPSYTFERGIAETIDWYLANQGWVEEVVSGAYREYYEMQYGAA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatacgttcacccctacctctttacttgttacgggaggggcggggttcatcggt
tccaatttcatcaaccacttcatggcggggaacccgcggtgccgggtgatcaacctggac
ctgctgacctatgccgggaacctgaagaacctgacggcggtggaggcgaacgccaactac
cgcttcgtgaagggtgacatctgcgacgccgagctggtggcgcgcctgctggccgaggag
aaggtggatgccgtcgcgcatttcgccgccgaatcgcacgtcgaccgctccatcaccggc
cccgacatattcgtgagaaccaacgtgatggggacccagaccctcctggaggcgagccgt
ctgcacgccgagacgctccccgacttccgcttcctgcaggtctccaccgacgaggtgtac
ggcagcctagggcccgaagggtacttcaccgaggagacgccgctggcgcccaactccccg
tattccgcgagcaaggccggtgccgacctcctggtgcgcgcctatttcgagaccttcgga
ctgccgaccctgaacacccgctgctccaacaactacggtccctatcacttccccgagaag
ctgatcccgctcatgatccacaacatcctcaagaagcgctccctgccggtctacggcgac
gggctgaacgtgcgcgactggctgcacgtgaaggaccactccgcagccatcgagcgcgtg
ctcaagagcggcaaaccgggggaaatcttcaacgtgggcggcaacaacgagtggaagaac
atcgacatcgtgaatctggtctgcgacctgatggacgagcggctggggcgcgccccgggg
gagagccgcgagctgatcaccttcgtgaaggaccgcaaggggcacgacaggcgttacgcc
atcgacgcctccaagctcaagcgcgagctctcctgggagccgagctacaccttcgagcgc
ggcatcgccgagaccatcgactggtacctggccaaccaggggtgggtcgaggaggtggtg
agcggcgcctaccgggaatactacgagatgcagtacggagcggcgtaa
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