KEGG   Geomonas diazotrophica: KP003_03620
Entry
KP003_03620       CDS       T07937                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
gnt  Geomonas diazotrophica
Pathway
gnt00521  Streptomycin biosynthesis
gnt00523  Polyketide sugar unit biosynthesis
gnt00525  Acarbose and validamycin biosynthesis
gnt00541  Biosynthesis of various nucleotide sugars
gnt01100  Metabolic pathways
gnt01110  Biosynthesis of secondary metabolites
gnt01250  Biosynthesis of nucleotide sugars
Module
gnt_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:gnt00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    KP003_03620 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    KP003_03620 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    KP003_03620 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    KP003_03620 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    KP003_03620 (rfbB)
Enzymes [BR:gnt01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     KP003_03620 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD Polysacc_synt_2 RmlD_sub_bind NAD_binding_4 NAD_binding_10 NmrA
Other DBs
NCBI-ProteinID: QXE87504
LinkDB
Position
838565..839632
AA seq 355 aa
MQDTFTPTSLLVTGGAGFIGSNFINHFMAGNPRCRVINLDLLTYAGNLKNLTAVEANANY
RFVKGDICDAELVARLLAEEKVDAVAHFAAESHVDRSITGPDIFVRTNVMGTQTLLEASR
LHAETLPDFRFLQVSTDEVYGSLGPEGYFTEETPLAPNSPYSASKAGADLLVRAYFETFG
LPTLNTRCSNNYGPYHFPEKLIPLMIHNILKKRSLPVYGDGLNVRDWLHVKDHSAAIERV
LKSGKPGEIFNVGGNNEWKNIDIVNLVCDLMDERLGRAPGESRELITFVKDRKGHDRRYA
IDASKLKRELSWEPSYTFERGIAETIDWYLANQGWVEEVVSGAYREYYEMQYGAA
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgcaggatacgttcacccctacctctttacttgttacgggaggggcggggttcatcggt
tccaatttcatcaaccacttcatggcggggaacccgcggtgccgggtgatcaacctggac
ctgctgacctatgccgggaacctgaagaacctgacggcggtggaggcgaacgccaactac
cgcttcgtgaagggtgacatctgcgacgccgagctggtggcgcgcctgctggccgaggag
aaggtggatgccgtcgcgcatttcgccgccgaatcgcacgtcgaccgctccatcaccggc
cccgacatattcgtgagaaccaacgtgatggggacccagaccctcctggaggcgagccgt
ctgcacgccgagacgctccccgacttccgcttcctgcaggtctccaccgacgaggtgtac
ggcagcctagggcccgaagggtacttcaccgaggagacgccgctggcgcccaactccccg
tattccgcgagcaaggccggtgccgacctcctggtgcgcgcctatttcgagaccttcgga
ctgccgaccctgaacacccgctgctccaacaactacggtccctatcacttccccgagaag
ctgatcccgctcatgatccacaacatcctcaagaagcgctccctgccggtctacggcgac
gggctgaacgtgcgcgactggctgcacgtgaaggaccactccgcagccatcgagcgcgtg
ctcaagagcggcaaaccgggggaaatcttcaacgtgggcggcaacaacgagtggaagaac
atcgacatcgtgaatctggtctgcgacctgatggacgagcggctggggcgcgccccgggg
gagagccgcgagctgatcaccttcgtgaaggaccgcaaggggcacgacaggcgttacgcc
atcgacgcctccaagctcaagcgcgagctctcctgggagccgagctacaccttcgagcgc
ggcatcgccgagaccatcgactggtacctggccaaccaggggtgggtcgaggaggtggtg
agcggcgcctaccgggaatactacgagatgcagtacggagcggcgtaa

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