Geomonas diazotrophica: KP003_04130
Help
Entry
KP003_04130 CDS
T07937
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
gnt
Geomonas diazotrophica
Pathway
gnt00010
Glycolysis / Gluconeogenesis
gnt00020
Citrate cycle (TCA cycle)
gnt00620
Pyruvate metabolism
gnt00650
Butanoate metabolism
gnt00720
Other carbon fixation pathways
gnt01100
Metabolic pathways
gnt01110
Biosynthesis of secondary metabolites
gnt01120
Microbial metabolism in diverse environments
gnt01200
Carbon metabolism
gnt01210
2-Oxocarboxylic acid metabolism
Module
gnt_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
KP003_04130 (nifJ)
00020 Citrate cycle (TCA cycle)
KP003_04130 (nifJ)
00620 Pyruvate metabolism
KP003_04130 (nifJ)
00650 Butanoate metabolism
KP003_04130 (nifJ)
09102 Energy metabolism
00720 Other carbon fixation pathways
KP003_04130 (nifJ)
Enzymes [BR:
gnt01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase (ferredoxin)
KP003_04130 (nifJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
TPP_enzyme_C
Fer4_7
Fer4
Fer4_10
Fer4_8
Fer4_21
Fer4_6
Fer4_9
Fer4_2
Fer4_16
Fer4_17
LdpA_Fe-S-bd
Motif
Other DBs
NCBI-ProteinID:
QXE87601
LinkDB
All DBs
Position
950090..953674
Genome browser
AA seq
1194 aa
AA seq
DB search
MSRKMVTIDGNTAAAHVAHATNEVIAIYPITPSSVMGEISDAKSAAGEKNIWGTVPLVSE
LQSEGGAAGAVHGALQAGALTTTFTASQGLLLMIPNMYKIAGELTSTVFHVSARALATQA
LSIFGDHSDVMSCRATGWAMLCSNNVQEVMDFALIAQAATLRSRIPFLHFFDGFRTSHEV
QKVEALSRDDMRAMIDNELVNAHRARCLTPDRPVLRGSAQNPDVYFQGRETVNRFYPATI
DIVEKEMEKFAALTGRAYSVVEYAGAPDADRVIVIMGSGADTVQETVATLNALGEKVGVV
KIHLYRPFPLKAFVEALPASVRRIAVLDRTKEPGALGEPLYLDVRTAIGEGMAAGFSNFV
GYPTIVGGRYGLGSKEFTPAMAKAVFDNLNEAQPRSNFAVGINDDVTGASLDYDSSFRTG
MEGTYEAMFFGLGSDGTVGANKNSIKIIGEATDNFAQAYFVYDSKKAGTITTSHLRFGKK
PINAPYLIDNADFVACHNFTFLEKYDMLGKAKPGATFLLCSPFEQSEVWDKMPVEVQKQI
IDKKLKVYTINAIKLAEELGLGARINVIMQTAFFKISGIIPLESAIAEIKGAIKKSYGKA
GEKVVAMNNAAVDQALLNIHEVAVPAVTSSTITMPPPVGAGAPHFVKEVTGRIIAGFGDD
LPVSAMPIDGTFPTATSQYEKRNIAVEIPVWDEKLCIQCAICSFVCPHAAIRVKAYPAEA
LAGAPAGFKCADSKMPELKEHKVTFQVAPEDCTGCGACAHNCPAKDKENPGHKALDMRFQ
PPLRAAEAANYHFFLGLPDLDPAVVKLDTLRGSQLVRPLFEYSGACAGCGETPYLKLLSQ
LFGDRALIANATGCTSIYGGNLPTTPWAKRADGRGPAWSNSLFEDNAEFGYGMRLAVDKF
SQAARELLEQLLDCGCGSCTTIAPLMREILDAEQSGQAAIEAQRLRVARLKEALAGCDEE
AAAQLLPIADYLVQKSVWCVGGDGWAYDIGYGGLDHVIASGKNVNILVLDTEVYSNTGGQ
ASKSTPIGAVAQFAAGGKSMAKKDLGMMAMAYGHVYVASVSLANPGQVVKAFIEAEAHDG
PSLIIAYSHCIAHGIDMTRGVDEQRKAVSSGYWPLYRYNPALAEKGRNPLQLDSKAPTTS
FEEYAGGENRYKVLRKMNPEVAEQLMQKASAWAADRFDYYTKLAALDFGGEGKQ
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaaaaatggtaaccatcgacggcaacaccgcggccgcccacgtggcccacgcc
accaacgaggtcatcgcgatctacccgatcaccccttcctcggtcatgggggagatctcc
gacgcgaagagcgccgcgggtgagaagaatatatgggggacggtaccgctggtctccgag
ctgcagtccgaaggcggcgccgccggcgcggtgcacggcgcactgcaggcgggcgccctc
accacgaccttcacggcgagccaggggctcttgctgatgatcccgaacatgtacaagatc
gccggcgagctcacctccaccgtcttccacgtctcggcccgggcgcttgccacccaggct
ttgtccatcttcggcgaccattcggacgtgatgtcctgccgcgccaccggctgggccatg
ctctgctccaacaacgtgcaggaggtgatggacttcgccctgatcgcccaggcggcgacc
ctgcgctcccggatcccgttcctgcacttcttcgacggcttccgcacctcccacgaggtg
cagaaggtcgaggcgctctcccgagacgacatgcgcgccatgatcgacaacgagctggtc
aacgcgcaccgtgcccgctgcctcaccccggaccgcccggtcttgcgcggcagcgcccag
aacccggacgtctacttccaggggcgcgagacggtgaaccgcttctacccggccaccatc
gacatcgtggagaaggagatggagaagttcgcggcgctcaccggacgcgcatacagcgtg
gtcgagtacgccggcgcgccggacgccgatcgggtcatcgtgatcatgggctccggcgcg
gacaccgtgcaggaaacggtggcgaccctgaacgcgctgggcgagaaggtgggcgtggtc
aagatccacctgtaccgccccttcccgctcaaggccttcgtcgaggcgctccccgcctcg
gtgcgcaggatcgcggtcctcgaccgcaccaaggaaccgggggcgctgggcgagccgctc
tacctggacgtacgcaccgccatcggcgaggggatggccgccggcttcagcaacttcgtc
gggtaccccaccatcgtcggggggcgctacggcctgggctccaaggagttcaccccggcc
atggccaaggcggtgttcgacaacctgaacgaggcgcagcccaggagcaacttcgcggtc
ggcatcaacgacgacgtgaccggcgcgagcctcgactacgacagctccttcaggaccggg
atggaggggacctacgaggccatgttcttcggccttggctccgacggcaccgtgggggcc
aacaaaaactccatcaagatcatcggcgaggcgaccgacaacttcgcccaggcctatttc
gtctacgactccaagaaggccgggaccatcaccacctcgcacctgcgcttcgggaagaag
ccgatcaacgcgccgtacctgatcgacaacgccgacttcgtcgcctgccacaacttcacc
ttcctggagaagtacgacatgctgggcaaggcgaagcctggcgccaccttcctgctctgc
tccccgttcgagcagagcgaggtctgggacaagatgccggtcgaggtgcaaaagcagatc
atcgataagaagctcaaggtctacacaatcaacgccatcaagctggccgaggagctcggc
ctgggcgcccgcatcaacgtgatcatgcagaccgccttcttcaagatctccggcatcatt
ccgcttgagagcgccatcgcagagatcaagggggccatcaagaagagctacggcaaggcg
ggcgagaaggtggtggccatgaacaacgccgccgtcgaccaggcgcttttgaacatccac
gaggtggccgtccccgcggtaacctccagcaccatcaccatgccgccgccggtaggggcg
ggcgctccccacttcgtgaaggaggtcaccggccgcatcatagccggcttcggcgacgac
ctcccggtctccgccatgccgatcgacggcaccttcccgaccgcgacctcgcagtacgag
aagcgcaacatcgcggtggagatcccggtctgggacgaaaagctctgcatccagtgcgcc
atctgctccttcgtctgcccgcacgcagccatccgggtgaaagcctacccggccgaggca
ctcgccggcgcgccggcagggttcaagtgcgccgactccaagatgccggagctgaaggag
cacaaggtgaccttccaggtcgcccccgaggactgcaccggctgcggcgcatgcgcccac
aactgcccggccaaggacaaagagaacccggggcacaaggcgctggacatgcggttccag
ccccccttacgcgcggccgaggccgccaactaccacttcttcctggggcttcccgacctc
gatccggcggtggtaaagctggacaccctgcgcggcagccagctggtgcgccccctgttc
gagtattccggcgcctgcgccggttgcggggaaacgccgtacctgaagcttctctcccag
ctcttcggcgatagggcgctcatcgccaacgcgaccggctgcacctcgatctacggcggc
aacctccccaccacgccgtgggcgaagcgggccgacgggcgcggcccggcctggtccaac
tcgctcttcgaggacaacgctgagttcggctacggcatgaggctcgcggtggacaagttc
agccaggcggcccgggagcttttggagcagcttcttgactgcggctgcggctcctgcacg
accatcgcccccctgatgcgggagatcctggacgccgagcagtccgggcaggccgccatc
gaggcgcagcggctgagggtggcccggctcaaggaagcccttgccggctgtgacgaggag
gccgcggcgcagctccttcccatcgcggactacctggtgcagaagtcggtctggtgcgtg
ggcggcgacggctgggcctacgacatcggctacggcggcctggatcacgtcatcgcctcc
ggcaagaacgtcaacatcctggtgctggacaccgaggtctattccaacaccggcgggcag
gcctccaagtccaccccgatcggcgcggtggcgcagttcgccgccggcggcaagtccatg
gccaagaaggacctcggcatgatggccatggcctatggccacgtctacgtggcgtccgta
tccctggcgaaccccggccaggtggtcaaggccttcatcgaggcagaggcccacgacgga
ccttcgctgatcatcgcctactcgcactgcatcgcgcacggcatcgacatgacccgcggc
gtggacgagcagaggaaggcggtctcctccggctactggccgctgtaccgctacaacccg
gcactggccgaaaaggggaggaacccgctgcaactggacagcaaggccccgacgaccagc
ttcgaggagtacgcggggggcgagaaccgctacaaggtgctcaggaagatgaaccccgag
gtggccgagcagttgatgcagaaggcgagcgcctgggccgcggaccgcttcgactactac
acgaagctggcggctctggatttcggcggggaaggaaagcagtaa
DBGET
integrated database retrieval system
