Geomonas nitrogeniifigens: KP003_04840
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Entry
KP003_04840 CDS
T07937
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gnt
Geomonas nitrogeniifigens
Pathway
gnt00260
Glycine, serine and threonine metabolism
gnt00630
Glyoxylate and dicarboxylate metabolism
gnt00670
One carbon pool by folate
gnt00680
Methane metabolism
gnt01100
Metabolic pathways
gnt01110
Biosynthesis of secondary metabolites
gnt01120
Microbial metabolism in diverse environments
gnt01200
Carbon metabolism
gnt01230
Biosynthesis of amino acids
gnt01240
Biosynthesis of cofactors
gnt04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KP003_04840
09102 Energy metabolism
00680 Methane metabolism
KP003_04840
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KP003_04840
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
KP003_04840
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
KP003_04840
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
KP003_04840
Enzymes [BR:
gnt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
KP003_04840
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
OKR_DC_1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QXE87735
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Position
1102688..1103935
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AA seq
415 aa
AA seq
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MSVLETFDPAVAEVIRHETERQEYNLELIASENFVSPAVLEAQGSVLTNKYAEGYPGKRY
YGGCHEVDKVENLAIERAKELFGADHVNVQPHSGSQANMAVYFSVLKPGDTVLGMNLAHG
GHLTHGSPVNFSGKLFNIVPYGVSQETQTIDYEECERLAVEHKPKMIVVGASAYPRIIDF
EAFRRIADKVGAVVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMIMCRE
EWAKTLNSNIFPGIQGGPLMHVIAAKAVAFKEALTPEFKQYQQQIVKNAQALAAGLTSRG
FKLTSGGTDNHLMLVDLSQTELTGKVAEEALDRAGITVNKNGIPFDTRSPFITSGIRIGT
PAATSHGLKEAEMEQVAGFIADVLGNVNDEAKLAAVKTQVNALMKRFPMYADRLA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtactggaaacattcgacccggcagtggcggaagtcatcaggcacgagactgag
cgccaggagtacaacctcgaactgatcgcctctgagaacttcgtttcccccgcggtgctc
gaggcgcagggctcggttctcaccaacaagtacgccgaggggtaccccggcaagcgttac
tacggcggctgccacgaggtcgacaaggtcgagaacctcgccatcgagcgcgccaaggag
ctgttcggcgccgaccacgtcaacgtccagccgcattccggttcccaggccaacatggcc
gtctacttctccgtgctgaagccgggcgacaccgtgctggggatgaacctcgcccacggc
ggccacctcacccacggttccccggtcaacttctccggtaaactcttcaacatcgtcccg
tacggcgtctcccaggagacccagaccatcgactacgaggagtgcgagcgtctcgccgtc
gagcacaagccgaagatgatcgttgtgggggcgtccgcctacccgcgcatcatcgacttc
gaggccttccgtcgtatcgccgacaaggtgggcgcggtggtcatggtggacatggcacac
atcgccggcctggttgctgccggcctgcacccgagcccggttccctacgccgagttcgtg
accaccaccacccacaagaccctgcgcggaccgcgcggcggcatgatcatgtgccgcgaa
gagtgggccaagaccctgaactccaacatcttcccgggcatccagggcggcccgctcatg
cacgtgatcgccgccaaggcggtcgccttcaaagaggcgctcactccggagttcaaacag
taccagcagcagatcgttaagaacgcccaggcgctcgccgccggcctcaccagccgcggc
ttcaagctcacctccggcggcaccgacaaccacctgatgctggtcgatctctcccagacc
gagctgaccggcaaggtcgccgaggaggcgctcgaccgcgccggcatcaccgtgaacaag
aacggcataccgttcgacacccgttcgccgttcatcacctccggtatccgcatcggcacc
ccggcggccaccagccacggcctgaaagaggccgagatggagcaggtagccggcttcatc
gccgatgttttgggcaacgtcaacgacgaagccaagctcgccgcggtcaagacccaggtg
aacgcgctgatgaaacgcttcccgatgtacgccgaccgcctcgcctag
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