KEGG   Geomonas diazotrophica: KP003_05055
Entry
KP003_05055       CDS       T07937                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
gnt  Geomonas diazotrophica
Brite
KEGG Orthology (KO) [BR:gnt00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gnt02044]
    KP003_05055 (tssC)
Secretion system [BR:gnt02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   KP003_05055 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QXE87775
LinkDB
Position
1148430..1149914
AA seq 494 aa
MEELTREKQVQFDAPQPAPQLLELIATEGRLARCEEQRGYAQEMLVELVQQVLAGEMVFS
GDTERMLHGRIAEIDRLINDQVNEIIHHAEFQKLEASWRGLTYLVHQAETGTNLKIRVLN
ASKQELAKDMEKAAEFDQSTLFKKVYEEEFGSFGGASYGCLVGDYEFGNTPQDLSLLTRM
SEVAAAAHAPLITSAASTLLGVESYAGLDGPRDLAKVFQGADYARWRSFRMSEDAKYVAL
CLPHVLMRLPYGPDSDPVESFQLEEVTGGDHAKYLWGNAAYCLAGRITDAFSRYGWTAAI
RGVEGGGAVADLPIHTFDTGEGELAAKCPTEIAITDRREKELADLGFVPLVHCKGTDMAA
FFSVQSVHKPKLYDTDAANANARLSAQLQYILAVSRFAHYLKAMMRDKVGSFGTRKNVED
YLNRWISRYVLLDDDAGQEMKARFPLREARVEVFDQPGRPGCYRAVAFLKPHYQLDELTI
SLRLVANLPSPRTG
NT seq 1485 nt   +upstreamnt  +downstreamnt
atggaagagctcactagagagaagcaggtgcagttcgacgcgccgcagccagccccgcag
ttgctcgaactcatcgccaccgaagggcgccttgcgcgctgcgaagagcagcgaggatac
gcgcaggagatgctggtcgaactggtacagcaggtgctggcaggggagatggtgttcagc
ggtgacaccgagcggatgctccatgggaggatcgccgagatcgaccgactgatcaacgac
caggtgaacgagatcatccatcatgccgagttccagaaactggaggcttcctggcgcggc
ctcacctacctggtgcaccaggcggaaaccgggaccaatttgaagatccgggtgctgaac
gcgtccaagcaggagctggccaaggacatggagaaggcggccgagttcgaccagtcgacg
ctcttcaagaaggtctacgaggaggagttcggcagtttcggtggcgcctcgtatggctgc
ttggtcggggactacgagttcggcaacacgccgcaagacctgtcgctgctgacccggatg
tcggaggttgccgcggcggcgcatgctccgctgatcacctcggccgcttcgaccctcttg
ggggtggaaagctatgccggactcgacggaccgagggatctggccaaggtgttccaggga
gccgactacgcccggtggcgttccttccggatgtccgaggacgcgaagtacgtagcactt
tgcctgccgcatgtgctgatgcggctgccgtacggaccggatagcgatccggtcgagtcg
ttccagctcgaggaagttaccggcggcgaccacgccaagtatctctggggcaacgccgcc
tactgtcttgccggccgcatcaccgacgccttctcgaggtacggttggaccgcggcgatc
cgcggcgtggaagggggaggggcggttgccgatctgccgatccacaccttcgatacgggg
gaaggggaactggcagcgaagtgcccgaccgagatcgccatcaccgaccggcgcgagaag
gaactcgccgatctcggcttcgtccccctggtgcactgcaaggggaccgacatggcggcg
ttcttcagcgtccagagcgtacacaagcccaaactctatgataccgatgccgccaacgct
aacgcgaggctttccgcccaactccagtacatcctggcagtctcccgctttgcccattac
ctgaaggcgatgatgagggacaaagtcggcagcttcgggaccaggaaaaacgtcgaggat
tatctgaaccgctggatcagcaggtacgtgctgctggacgacgatgcgggacaggagatg
aaagcccgctttccgctgagagaggcccgcgtcgaggtattcgatcagccggggcggccg
ggatgctaccgggccgtcgctttcctgaagccgcactatcagctcgatgagctcaccatt
tctctaaggctcgtcgcaaacctgccctcgccccggacgggctga

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