KEGG   Geomonas nitrogeniifigens: KP003_05070
Entry
KP003_05070       CDS       T07937                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
gnt  Geomonas nitrogeniifigens
Brite
KEGG Orthology (KO) [BR:gnt00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gnt02044]
    KP003_05070 (tssF)
Secretion system [BR:gnt02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   KP003_05070 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: QXE87778
LinkDB
Position
1150984..1152762
AA seq 592 aa
MPDNILNYFERELSYLRDMGSCFARKYPKVAGRLLLEPGKCEDPHTERLIEAFAFLCARI
QCKIDDGLPEITQALLQVVYPQLTAPIPSCAVVKFAPLFRNVPQGGYEIAKGTPLFSKPV
DGVPCQFRTAYPVVLRPVEVIDASLETPVKLVKGAQQVVRVRLLLHGAAGFSCDTLRFYL
NGQPQHVFPLYQLLLNHLCRVEHVPAGASVADSLQLSPGCLQPVGYAADEDLLPYPEQSF
PGYRLLLEYFAFPHKFLFIDLSGLSVLWKDAALGDAIDLLFYLDTAAPESMAVGAETFCL
YATPVVNAFQKIAEPIRHNHGKSEYRIVPDLRREGALEVLSVDEVTATEATSPGEVKQYR
PVFSGDGGEDSAGLWQMQRRPASRLHDGGTDVFLSVCELLQTAIVPLEETLLVRVTCSNR
NLPVRLPFGDPAGDFDTESTAPLAFINCLLKPTPSLRPFLDGGQQRRLISHLSLNYISLV
EGGARALRQLLSLYDFASSSATRHQISGIVSVRSRTVTRRIGAGFCRGLEVTVVFDEERY
VGSGVYLFASILERFLGQYVAVNSFVQLVAVSASNDAVINRWPPRTGDKVLL
NT seq 1779 nt   +upstreamnt  +downstreamnt
atgcccgataacatcctcaactacttcgaaagagagctcagctacctgcgcgacatggga
agctgtttcgccaggaagtatcccaaggtggcggggaggctcctgcttgagccgggcaag
tgcgaggacccgcacaccgagcggctgatagaggctttcgcctttctctgcgcccgcatc
cagtgcaagatcgacgatgggctgccggagatcacccaggcgcttttgcaggttgtctat
ccgcaactgacggctccgatcccgtcctgcgcggtggtgaagttcgcgccactcttcagg
aacgtgccgcagggggggtacgagatcgccaaagggacgcctctcttctccaaaccggtt
gacggcgtgccctgccaattcaggactgcctaccctgtcgtccttcggcccgttgaggtc
atcgatgcgtcgttggagacgcctgtaaagctggtaaaaggcgcacagcaggtggtgcgg
gttcggttgttgctgcacggcgccgccggcttttcgtgcgacacgctgcgcttttacctg
aacggccagccccagcacgtcttcccgctgtaccagctactgctgaatcacctttgccgt
gttgaacatgtgccggccggtgcatcggtcgctgattccctgcaactgtcacccggttgt
ctgcaacctgtcggttatgctgcagacgaggaccttctgccgtaccctgagcaatctttc
ccggggtatcggctgctcctcgagtacttcgcctttccgcacaagttccttttcatcgat
ctcagcgggctgtcggtgctatggaaagatgcggccctcggtgatgcgattgacctgctt
ttttacctcgacaccgctgcgccggagtccatggcggtcggggcagagactttctgtctc
tatgcgacccccgtcgtcaacgctttccagaagatagcggagccgatcaggcacaaccac
ggcaagagcgagtacaggatcgttcccgacctgagacgtgagggcgccctcgaggtactt
agtgtagatgaagtcacggctaccgaggcaacttcccccggtgaggtaaagcagtatcgc
cccgtattctcaggggacggcggggaggatagtgcaggcttatggcagatgcagcggcgg
ccggcatcgcgcctgcacgacggcggaaccgacgtgtttctttccgtttgcgagcttctc
caaactgcgattgttccgttggaagaaacgcttctggtccgagtcacctgctccaaccgc
aacctcccagttaggcttcctttcggggatcctgccggagatttcgacaccgaatctacc
gcaccactcgccttcatcaactgccttctcaaaccgacgccctctctacgtccgttcctc
gatggggggcagcaacgccgtctgatctcccatctctccctgaactacatttcccttgtc
gaaggaggtgcccgagcgctgaggcaactcctgtcgctgtatgactttgcctcgtcctct
gccacccggcaccagataagcggcatcgtgtcggtaaggtcccgaacggttaccaggaga
ataggagcaggattctgccgcgggttggaagtgaccgtggtcttcgacgaagagaggtac
gtcggcagcggcgtttacctgttcgcctccattctcgagaggttcctggggcagtacgtg
gcggtcaactcattcgtgcagcttgtggccgtgagcgcaagcaacgacgcggtcatcaac
cggtggcctccccgaaccggcgacaaggtgctgctgtga

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