Geomonas nitrogeniifigens: KP003_06570
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Entry
KP003_06570 CDS
T07937
Name
(GenBank) OmpA family protein
Organism
gnt
Geomonas nitrogeniifigens
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
DUF11
SdrD_B
CarboxypepD_reg
YfaZ
Motif
Other DBs
NCBI-ProteinID:
QXE88057
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All DBs
Position
1503659..1509238
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AA seq
1859 aa
AA seq
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MGGRLIRAGLLGVALALALPGAAPCLTPSGTVISHDFAARFATPAPRQARSNQTQITVRD
LADPELVPPRTATAKAGVPVDFQHVLTNRGNFPDSFQLKAVLQSGVTESGPAPALRFYLA
DGVTPVPANSEGVQVVGPVPAGGTVNLVLRAIPAAGSEGRVATIVLSATSQLIPARSSSV
NDQLQVPVPGSVAVLKTVSPAGAVLPGTVLSYRLTLNNGEASPVTGVLVVDPLDELLEYQ
QGSAALPEGVAGTVNYDAGSRSLRFDFPLLPAGFSGSVAFRAAVRSDAPGNAPIVNTAGV
TSSLSGTPTLSNSTFNTVLARALLVSKEAGSAVAEAGDIVPYTVRVENVGAALLEHVTVE
DRIPRGFRYLKGSSHLDGFAVADPVGGAQRLSWDVGTLPPGGRKVLSYRLVLSAEVPVGT
SVNWARASGVTEAGTTSIAPPASAAVKVRPSILGDKAVIMGRVFRDRNGNGVPDPGEPGE
PGVRIYLEDGSFVFSDAEGKYSFTGIASGDHVLKIDRSTLDPTLRSLPYNTAFAGVGWSQ
FVTVPFGGPARGDFALVPAQATPTPPDAAAAGAAPPTPVTPASPLVPTVHQAPSLPADWL
LVGLGSATVGGKAGGDAGLFHEERLAFYTRGTLLGDYRLTAAYDSDKERRDGVFQTIDPE
RYYPVYGDAGDIGYDAESRGKLYLKVQSGRSYLMEGDYRTDLSENEFSRYDRALNGAKFE
VNREHLALKGFESRTEETIVRDQIAGNGTSGHYLLSRRPVFENSERVRIEVRDRYHSERV
ISVTEKVRYADYSIDYLAGTILFKEPVPSLDQFLNPVTIVITYQAQGGGEKRYVYGGRAE
LRTDQGAHLGGTAVVEEHAFKNSSLYGLDAGWRLGSWLAVKGEGAVSESWEKGRGSAWKT
DLILRPAEPVSLGLYYRKVDADFFNPSMSGSETGTEKYGGRLDYRAPGNTLVFAESFVQR
DETARRRLVGKELGVTRKFSLLDADAGVKLLREEKEGRSGESDLVYGGVKGSLTPRLDAT
LRREQLLSPSSIAQYQSKTFAKLDYRLSERTKAFITEEYQEGSPLLRHATLFGLESRLSE
RMRLTTGYSLSSGVLGSTEQSNIDLHSKLVEQDGFSLSSRTGYQLEDSLSGERGQAVLGL
NSRYRLAQGLFVNSGFERVQTVQGDGGTRTAFTLAGEYLRPRDLKLTGRYEIRTGPGETA
SLYDAHAAYRLNPSFTLLAKASLWDRDADAGNDVTADSYLGGAFRPLAENPLQLLSLVRY
KVEKRGTLAGSPDLRSVIVSAEPTYRLVSRWTAQGKYAGKVSWSEGTGGRWNSYTDLVLA
GLSYDLAERWELSAYLKLLNQYDAGMHSLGAVGSAGYRVYRNVVLAAGYNYARFDDRDLT
GETFRGEGPFFGVKVKFDEDMFESADARLLPLPPPPPAPVAAPTPAPEPEPEPLPAVLVT
LERLDEPLLLSGSAELFTLLVNGEAARLPSTAVTLSRERLASLDLKGGRFAAPLRLLTSV
EEPDQVRCWSLVYLNRAGAEIRKTGGNGPPPKRIAWEGETDRSKVEQGEIYQCQLQVTYL
DGSVFRTGRELFGVNRREAVLLTLSGGAFVFDKSALTTEAKRLLSGAARVLREHPGEKVI
VEGHTDGIGSAEYNMALSKRRCDAAADYLVRAEGIAPARLLRRWYGKSRPVADNVTTPGR
RLNRRVELKGDYEQLRPTEPDDRYRTRPFVTINGREIPVDRLGRYETSLPGETARLKVEM
GDSRGRFLATELPLPELTVAQPPPSVLVGYGASASGVSVSADGAILCRLSGSAGEGERLE
LDGRELPLTSLGAFAVEFPLGSGDRVLGMVVRNGVGCSRLLNLRLRSEKQLVAPVGVQP
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atgggagggagacttatccgggcaggcctcctcggggtggcacttgcgctcgccctcccc
ggcgctgcgccctgcctcaccccgtcgggaaccgtgatcagccacgatttcgccgcgcgg
ttcgcgacgccggccccgcggcaggcccgctccaaccagacccagatcaccgtgagggac
ctggcggacccggaactggtcccgccgcgaaccgcgaccgccaaggcgggggtcccggtt
gatttccagcacgttctcaccaacagggggaacttccccgacagtttccagttgaaggcg
gtgctgcagtccggggtaacggaatccggtccggcacccgccctgcgcttctacttggcc
gacggcgtcacgccggtacctgcgaactccgagggggtccaggtcgtggggcccgtgccg
gcgggggggacggtgaacctggtgctgcgggccattcccgccgcgggaagcgaggggagg
gtggcgaccatcgtcctttcggcgacctcgcagcttattccggctcgaagcagcagcgtc
aatgaccagctgcaggttcccgtcccgggcagcgtcgccgtgttgaagacggtgagccca
gcgggggcggtgctgcccggtaccgtcctctcgtaccgtctcacgctgaataacggggag
gcctcgccggtgaccggcgtgttggtggtggaccccctggacgagctcctcgagtaccag
caggggagcgcagccctccccgaaggagtggctggaaccgtgaactacgacgccggcagc
aggtcgctgcgtttcgacttccccctgctccccgccggtttcagcggctcggtcgcattt
cgcgccgcggtgcgcagcgacgcccccggcaacgcccccatcgtcaacaccgccggcgtc
accagcagcctgagcgggacgccgaccctcagcaacagcaccttcaacacggtgctggcg
cgcgcccttttggtcagcaaggaggccggcagtgcggttgccgaggcgggggacatcgtg
ccctataccgtgcgggtggagaacgtaggtgcggcgcttttggagcacgtaaccgtggag
gatcgcatacccaggggattccggtacctgaaggggtcgagccacctggacggcttcgcc
gtcgcagacccggtggggggggcgcagcggttgagctgggacgtggggaccctgccaccc
ggggggcgcaaggtgctttcctaccggctggtcctttccgccgaagtcccggtcggcacc
agcgtcaactgggcccgggcctccggggtaacggaagcggggactaccagcatcgccccc
cccgccagtgcggccgtcaaggtgcggccgtcgattctcggggataaggcggtgatcatg
gggagggtcttcagggaccgcaacggcaacggcgttcccgaccccggcgagccgggggag
cccggggtcaggatctacctggaggacggttcgttcgtgttcagcgacgccgaggggaag
tacagtttcaccgggatcgcctccggcgaccacgtgctgaagatagaccgaagcacgctg
gacccgaccctgcgctcgttgccgtacaacaccgccttcgccggggtggggtggtcgcag
ttcgtgaccgttcccttcggtggcccggcgcggggcgacttcgccctggtgcccgctcaa
gcgacccccacgcccccggacgctgccgccgccggggcggctccgcctaccccggtgaca
cccgcgtctccactggtccccacggttcaccaggctccctcgctcccggccgactggctc
ctggtcggattgggcagcgccaccgtggggggcaaggccggcggcgacgcgggcctgttc
cacgaggagcgcctcgccttctacacacgcggcaccctcttgggcgactaccggctcacc
gccgcctacgactcggacaaggagcgccgcgacggggtgttccagaccatcgaccccgag
agatactaccccgtctacggtgacgccggtgacataggctacgacgcggagtccaggggg
aagctgtacctgaaggtccaatccggccgctcctatctcatggagggggactaccgcacc
gacctctcggaaaacgagttctcccgctacgaccgggcactcaatggggcgaagttcgaa
gtgaaccgggaacatctcgccttgaaagggttcgaaagccgaaccgaggagaccatcgtc
cgcgaccagatcgcgggaaacggcacctccgggcactaccttctctcccgaaggccggtc
ttcgagaacagcgagcgggtccgcatcgaggtgcgcgatcgctaccactccgagcgcgtc
atatccgtcaccgaaaaggtccgctacgccgactactccatcgattacctcgcggggacc
atcctgttcaaggagccggtcccttcgctggaccagttcctgaacccggtcaccatcgtg
atcacctaccaggcccagggggggggcgagaagcgctacgtctacggcgggcgcgccgag
ttacgcaccgaccagggcgcccacctcggggggaccgcggtcgtcgaggagcacgccttc
aagaacagctccctctacggcctcgatgccggatggcgcctgggcagttggctcgcggtg
aaaggcgaaggagcggtcagcgagagctgggaaaagggaagggggagcgcctggaagacg
gacctcattttgcgaccggccgagcccgtctccctggggctctactaccgcaaggtggat
gccgatttcttcaacccttccatgagcggcagcgagacaggtaccgagaagtacggcggt
cggctcgattaccgggcgccgggcaacaccctcgtcttcgcggagagtttcgtgcagcgc
gacgagaccgcacggcgcaggctggtcggtaaagagctcggggtgacgaggaagttctcc
ctgctggacgcggatgcgggtgtaaagctgctgcgcgaggagaaggaggggaggagcggg
gagtcggatctcgtctacggcggggtcaagggaagcctcaccccaaggctcgacgccacg
ctgcggcgcgaacagctcctttccccctccagcatcgcgcaataccagtccaagaccttc
gcaaagctcgactaccgcctgagcgagcggaccaaggccttcatcaccgaggagtaccag
gagggctctccgcttctgcggcacgcgaccctcttcggccttgagagcaggctttccgag
cggatgcgcctcaccaccggttattccctttccagcggcgtcctcgggagcaccgagcaa
agcaacatcgacctgcacagcaagctggttgagcaggacgggttcagcctctcctcgcgc
accggttaccagctggaagactctctctccggggagcgcgggcaggcggtcctggggctg
aacagccgctaccgcctggcgcaggggctcttcgtgaactccggtttcgagcgggtgcag
acggtgcagggggacggcggcacccgcaccgcgttcaccctggcgggggaatacctgcgt
ccccgggacctgaagctcaccgggcgctacgagatcaggaccggtccgggtgagaccgcc
tcgctctacgacgcccatgcggcctaccggttgaacccctccttcacccttttggccaag
gcctccctctgggaccgcgacgccgatgccggcaacgacgtcaccgcggacagctacctc
gggggcgccttccggccgctggcggagaacccgctccagctcctctccctggtgcgctac
aaggtggagaagcgggggacgctggccggaagccccgacctgcgcagcgtgatcgtctcg
gcggagccgacctaccgcctggtgagccggtggacggcacagggaaaatacgccgggaaa
gtgagctggtccgaagggaccggggggcgctggaacagctacaccgacctggtcctcgcc
gggctctcctacgacctcgccgagcgctgggagctctccgcctacctgaagctcctgaac
cagtacgacgccgggatgcactccctcggagcggtgggtagcgcaggttaccgggtctac
cgcaacgtggtgcttgccgctggttacaactacgcccggttcgacgaccgcgacctgacc
ggggagaccttccggggggagggccccttcttcggggtcaaggtgaagttcgacgaggat
atgttcgaatcggccgatgcaaggctcctccccctgcctcctccccccccggcgccggtg
gcggctccaacgcccgctccggaaccggagccggagccgctccccgccgtgctggtgacc
ctggagcgcctggacgagccgctgcttctttcggggagcgccgaactcttcaccctgctg
gtgaacggggaggcggcccggcttccctccaccgcggtcaccctctcccgggagcggctc
gcctcgctggacctcaaaggggggaggttcgccgcccccctgcgccttctcaccagcgtc
gaggagccggaccaggtccgttgctggagcctcgtttacttgaaccgcgccggagcggaa
atcaggaagacggggggcaacggcccccccccgaaacggatcgcctgggaaggggagacc
gaccggagcaaggtggaacagggggaaatctaccaatgccagctccaggtcacctacctg
gacggttccgtcttccggaccggccgcgagctcttcggcgtcaaccgccgcgaggcggtg
ctattgaccctatccgggggcgccttcgtcttcgacaagtccgccctcaccaccgaggcc
aagcgcctcctgagcggtgcggcccgggtgctgcgcgagcaccccggcgagaaggtgatc
gtcgaggggcacaccgacggcatcggcagcgcggagtacaacatggccctttccaaaaga
cgctgcgacgcggccgcggattacctggtgcgggcggaggggatcgccccggcgcgcctg
ttgcggcgctggtacggaaagtcgaggccggtcgcggacaacgtcaccacccccgggcgc
cggctgaaccgccgcgtggagcttaagggggattacgagcagctgcggccgaccgagccg
gacgacaggtaccgcacccgccccttcgtgacgatcaacgggcgggagatcccggtggac
cggctggggcgctacgaaacctcccttcccggggagaccgcgcgcctcaaggtggagatg
ggggattcgcgggggaggttcctcgccaccgaactcccgcttccggagctgaccgtggcg
cagccccccccctccgtcctggtcgggtacggcgcctccgcttccggcgtcagcgtgtcc
gcggacggcgccatcctctgccggctttcgggctcggcaggggaaggagagcggcttgag
cttgacggccgcgagctccccctgacctccctcggggccttcgccgtcgagtttccgctg
gggagcggagaccgggtgctggggatggtggtgagaaacggcgtcggctgctccagactg
ctcaacctgcggcttcgctccgagaagcagctggtcgcgccggtcggggtgcagccatga
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