Geomonas nitrogeniifigens: KP003_07240
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Entry
KP003_07240 CDS
T07937
Name
(GenBank) PAS domain-containing protein
KO
K02668
two-component system, NtrC family, sensor histidine kinase PilS [EC:
2.7.13.3
]
Organism
gnt
Geomonas nitrogeniifigens
Pathway
gnt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KP003_07240
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gnt01001
]
KP003_07240
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
gnt02022
]
KP003_07240
02035 Bacterial motility proteins [BR:
gnt02035
]
KP003_07240
Enzymes [BR:
gnt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
KP003_07240
Protein kinases [BR:
gnt01001
]
Histidine kinases
NtrC family
KP003_07240
Two-component system [BR:
gnt02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
KP003_07240
Bacterial motility proteins [BR:
gnt02035
]
Pilus system
Twitching motility proteins
KP003_07240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
PAS_4
PAS
PAS_9
HATPase_c_5
HATPase_c_3
PAS_8
Motif
Other DBs
NCBI-ProteinID:
QXE88187
LinkDB
All DBs
Position
1652601..1654226
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AA seq
541 aa
AA seq
DB search
MIEKKKVFWFILLRLLVVTLFLVTTVYLDVHTYDVSGEVAGKVLIRLIGATYLFSLLSLA
VLRRASPRTVRTLTYLQIVWDLILVTVLILVSGGVTSHYAFLYFLSIIAASALLARSQAY
YTASLCVILYGAILDFQYYGKLAPLGLSPYPAQQWGAEYLFYLIFVHCASFFLTAFLAGH
LAERARVSESALKEKAIDYEELERLNSCIVSTIDSGLLTINTSGRIRVFNRYAETLTGVS
QQDAYDRPLAEVLPGCAAFAPTFFESGQGEFPHKGPDGKELLLSFKSVPLLDKDGAVAGA
IFDLHDLTEMKRMAAELKRADRLAAVGELSARMAHEIRNPLAAISGSVQLVALRPWVDEK
DERLFSIILRETDRLDGLLRDFLFYAKPNQPTKVALNLHRVIGDLCALLATDPRLEGVGV
DNRLPDDLVVQFDKDQCTQVFWNLLVNAAEAITGDGRICVDGALIKANGGLNEVRISIRD
NGSGMSQEDVKRVFEPFFTTKKGGTGLGLATVYRIVETNGGRMSINSALGKGTTITLYLP
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaagaagaaggtcttctggttcatactgctgagactgctggtggtaaccctc
ttcctggttaccaccgtttatcttgacgtacacacctatgacgtaagtggcgaggtcgcc
ggcaaagtactgatccggctgatcggcgccacttaccttttctcgctgctttccctggcg
gtgctgcgcagggcgtccccccggacggtgcgcaccctgacctacctccagatcgtctgg
gacctgatcctggtcacggtgctgatcctggtctcgggcggggtgacttcccactacgcc
tttctctacttcctgtcgatcatcgccgccagcgcgcttttggcccgttcccaggcctac
tacacggcgtccctgtgtgtcatcctgtacggcgcgatcctggatttccagtactacggc
aagttggcaccgctagggctctccccctacccggcacagcagtggggggccgagtacctt
ttctacctgatctttgtgcactgcgcctccttcttcctgaccgcgttcctggccgggcac
cttgcggagcgcgcccgcgtctcggaaagcgcgctcaaggagaaggcgatcgactacgag
gagctggagcgcctgaactcctgcatcgtctcgaccatcgacagcggccttctcaccatc
aacacctccggcaggatccgcgtcttcaaccgctacgccgagaccctgaccggggtgtcc
cagcaggacgcctacgaccgccccctggccgaggtgctgccaggctgcgccgctttcgct
ccgaccttcttcgagtcgggacagggggaattcccgcacaaggggcccgacggcaaggag
ctgctcctgtcgtttaagtccgttccgcttttggacaaggacggggccgtcgccggggcg
atcttcgacctgcacgacctgaccgagatgaagcggatggccgccgaactgaagcgcgcg
gaccgcctcgccgcggtcggtgagctctctgcgcgcatggcccacgagatccgcaacccg
ttggccgcgatcagcgggtcggtgcaactggtggcgctcaggccctgggtggacgagaag
gacgagcggcttttttccatcatcctgagggagaccgaccggctggacggtcttttgcgc
gacttcctcttttacgccaagcccaaccagcccaccaaggtagcgctcaacctgcatcgg
gtgatcggcgatctctgcgcgctgcttgccaccgatcccagactggaaggggtcggggtc
gacaaccggctccccgacgacctggtggtgcagttcgacaaggaccagtgcacccaggtg
ttctggaacctcctggtgaacgccgcggaggccatcaccggcgacggccgcatctgcgtc
gacggcgccctcatcaaagcaaacggcggcctcaacgaggtgcgcataagcatcagggac
aacggttccgggatgagccaggaagacgtgaagcgggtgttcgagcctttcttcaccacc
aagaaggggggcacagggcttgggctcgcaacggtctaccgcatcgtggaaaccaacggc
ggcaggatgtccatcaacagcgccctggggaaagggaccacgatcaccctgtacctgcct
gcttaa
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