Geomonas diazotrophica: KP003_07910
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Entry
KP003_07910 CDS
T07937
Name
(GenBank) DEAD/DEAH box helicase
Organism
gnt
Geomonas diazotrophica
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
QXE88312
LinkDB
All DBs
Position
complement(1810934..1815148)
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AA seq
1404 aa
AA seq
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MPHPSRSTPYPSKAGAPNVQRSEQVTQPKQLHPKPHDLLARCTPQLSALVQLLSVIHAPL
SKHVLLNIVKKAGLAAPPGRSYTGLVLAEMLEELKNLGLVRHTGEGISCSPEVAHAATLH
AIESGAFEPMVRAAVAEIPMVSNWGSNFYRLSAHALRDVRIGVYRKDAREALDAAERYLR
QFPYEAQRSHPFDAICFHPFDEPWFRSLPVVLQGAALQAHLTSARSTLTPAEAPFRALAE
LAARPDVPHYLLDLYCLELLWRGRTSDAGAAAIEGSSSTQIAVLACCALQRGQYARSLEL
FRLALSALRKETGKRKAYLDDGTGPFFILALLATQEAKLLEEAAELCRFIAAKREWPDQE
VYHVLQGVIGERQGGRSSKELQEATLQRAPQSPLHALFRLMALYWCASDQHRREAKKLAG
LVQRLKDAGQLWLAREIEQASEPAAPSPPSAPSPSPEAAATPLYRALAPVESWQSSISAL
LRLNSEEATDPAAPQSRLIWHFEELRGFFQITPREQKQTPNGKWSGGRNVALKRLVEEAE
SLDFLSAQDRLICACINKDRGAGYYNRESYVLDQDQAVPLMVGHPQVYLDAAASVRLELV
HGEPEIQLTAQGETLQLQFFPPFQQDQKLYLQKETPTRIKVYQARSEHKKIAAIIGAGLK
LPARAKDQALAAINSLASVLTVHSDIGVDSAGQIPGDATPHFHLLPYQGGLRLQLLVRPF
SDAGPYFRPGAGGETVLAEVEGKRVQTRRDLKQEEECAAAALAQLTVLGETEEIEGEWLI
PATENALELLVQLQALGESVRVSWPQGARFKVKQTVTPGHCKLSVRQAKDYFELEGEVKV
NEGLALDLRQLVDLARNAQGRFVELGDGEFLALSSQLRRYLDDLTSCADPHGAAFRFHPL
ASSLFEDFAAEAGEFQGDRYWQAQMKRLHEAEAFRPQLPGTLQAELRGYQVEGFNWLNRL
SYWGVGACLADDMGLGKTVQALAQILSMAPQGPSLVVAPTSVCLNWESETARFAPTLNRI
VYGGPKRSELLQGLKPLDLVICSYGLLQQDAELLEAVQWQAVVLDEAQAIKNMATKRSQA
AMKLQGRFKMVATGTPIENHLGELWNVFRFINPGLLGSLKQFNVRYAAPIEKSEDKKARQ
RLKRLIQPFILRRTKNQVLEELPPRTEITIPVELGMEEVALYEAIRKSALDNLAGVGKVE
GKGELHLKILAEIMRLRRACCNPRLVLPDSAIPSAKLAAFAEILDELRENRHKALVFSQF
VGHLQIIRGYLNRAGIPYQYLDGSTPAPERKLRVDAFQSGAGDLFLISLKAGGVGLNLTA
ADYVIHMDPWWNPAVEDQASDRAHRIGQQRPVTIYRLVAKGTIEEKIVGLHQQKRGLADS
LLDESDLSGKASVEELLALLRSGS
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgccacatcccagccggtcaacgccatatccgagcaaggccggcgctcccaacgtccag
aggtccgaacaggtgactcagccaaaacaacttcaccccaaaccgcatgatctcttggcc
cgttgcacgccccaactgtccgcgctcgtccagctcctctccgtcattcacgcgcctctt
tccaagcacgtactgctcaacatcgtaaagaaggctggacttgccgcacctccgggacgg
agctacaccggcctggtcctcgccgagatgctggaggagttgaagaacctgggcctggtc
cgccacaccggcgagggaatttcctgctctcccgaggtcgcccacgccgcgaccctgcac
gcgatcgagagcggcgcattcgagccgatggtccgtgccgcggttgccgaaatccccatg
gtctccaactgggggagcaacttctaccgcctgtcggcgcacgccctgcgcgacgtgcgc
atcggcgtctaccgcaaggatgcaagggaagccctggatgccgccgaacgctacctgcgc
cagttcccctacgaggcccagcgcagccaccccttcgacgccatctgcttccaccccttc
gacgagccgtggttccgctccctccccgtggtgctgcagggggcggcgctgcaggcgcac
ctcacctccgcgagaagcaccctgacgcccgccgaagcccccttccgcgcacttgcagaa
ctggcggcacgccccgacgtcccccattacctgctcgacctttattgcctggagctgttg
tggcgtggccgcacgtccgatgccggggcggccgcaatcgaggggagcagttccacccaa
attgccgtgctcgcctgctgtgcactgcagcgcggccagtacgcccgctccctggagctt
ttccggttggccctctccgcgttgcgcaaggagaccggcaagagaaaggcgtacctcgac
gacggcaccggcccgttcttcatcctggctcttctcgccacccaggaagcgaaactcctg
gaggaggccgcggaattgtgccgcttcatcgccgccaagagggagtggccggaccaggag
gtgtaccacgtccttcagggtgtgatcggcgagcggcaaggtgggcgcagcagcaaggag
ctccaggaggcgaccctgcagcgcgccccccaaagcccgctccacgccttgttccggctg
atggcgctctactggtgcgcaagcgatcagcatcgccgcgaggccaagaagcttgccggc
ctggtgcagcggctgaaggacgcgggccaactctggcttgcccgcgagatcgagcaggcg
agcgagcctgccgcaccgtcgccaccttctgcaccgtcaccctcccctgaggccgcagcg
acgcctctgtatcgcgccttggccccggtcgaatcctggcaaagctccatctcggccctg
ctgcgcctgaacagcgaggaggcgacggacccggcagccccccagtcgcgcctcatctgg
cacttcgaggagttgcgcggcttcttccagatcaccccaagggagcagaagcagacgccc
aacggcaagtggagcggtggccgaaatgtcgcgctcaagcggctggtcgaggaagcggag
agtctcgatttcctcagcgcccaggaccgcctcatctgcgcctgcatcaacaaggatcgc
ggcgccggctactataaccgtgagagctacgtgttggaccaggaccaggcggtgccgctc
atggtcggccacccgcaggtctacctcgacgctgccgcctcggttcgcctggagctggtg
cacggagaaccggaaatccaattgaccgcgcagggggagaccctgcagctgcagttcttc
ccccctttccagcaggatcagaagctgtacctccagaaggagaccccgacgcggatcaag
gtctaccaggccagaagcgagcacaagaagatcgcagccatcatcggcgccggcctgaag
cttcccgcccgggccaaggaccaggcgctcgccgcgataaactcgctcgcttcggtcctc
accgtgcactcggacatcggcgtcgactcggccgggcagattccgggggacgccaccccg
cacttccacctgctgccgtaccagggcggactgcggctgcagctcctggtgcgccccttc
tcggacgcgggcccctatttccgtcccggtgccggaggcgagacggtcctcgccgaggtc
gaggggaagcgggttcagaccaggcgcgacctgaagcaggaggaggaatgcgccgccgcg
gccctggcccagctcacggtattgggagagacagaggagatcgagggtgagtggctgatt
cccgcgacggagaatgcgctggaactcttggtgcaattgcaggcgcttggcgaatcggtc
cgggtttcctggccgcagggcgcccgcttcaaggtaaaacagacggttacccccggacat
tgcaagctttccgtgaggcaggccaaggactacttcgagctcgagggggaggtgaaggta
aacgaggggctggccctcgacctgcgtcagctggtggatttggcccgcaacgcgcagggg
cgcttcgtggaactgggcgacggcgaattccttgccctctcctcccagctgcggcgctac
ctcgacgatctcacctcctgcgccgatccccacggcgccgccttccgcttccatcccctc
gcctcctccctgttcgaggatttcgccgcggaagcgggcgaattccagggcgaccggtac
tggcaggcgcagatgaaacggctgcacgaggccgaggccttcaggccgcagcttcccggc
acgctccaggcggagctgcgcggctaccaggtcgagggtttcaactggctgaaccggctc
tcctactggggcgtcggcgcctgcctcgccgacgacatggggctcggcaaaacggtccag
gcgctggcccagatcctcagcatggcgccgcagggcccgtccctcgtggtggcgcccacc
tcggtctgcctgaactgggagagcgagaccgccagattcgcgccgaccctgaaccgcatc
gtctacggcggcccgaaacgatccgaactgctgcaggggctcaagccgctcgacctcgtc
atctgcagctatggcttgctgcaacaggacgccgaactgctcgaggcggtgcagtggcag
gccgtcgtcctggacgaggcgcaggccatcaagaacatggcgaccaagaggagccaggcc
gccatgaagctccagggacgattcaagatggtggccaccggcaccccgatcgagaaccac
ctgggcgaactctggaacgtgttccgcttcatcaatccggggctgctcggctcgctgaaa
cagttcaacgtgaggtacgccgcacccatcgagaaaagcgaggacaagaaggcgcgccag
aggctgaaaaggctgatccagcccttcatcctgcgccgcaccaagaaccaggtgctcgag
gaactcccccccaggacggagatcaccatcccggtagagctcggtatggaagaagtcgcg
ctgtacgaggcgatcaggaagagcgcgctggacaacctggccggcgtcggcaaggtggag
ggaaagggagagctgcacctgaagatcctggcggagatcatgaggctgcgccgcgcctgt
tgcaacccgcgcctggtgctgccggacagtgccattccgagcgcaaagctggcggccttc
gccgagatcttggacgaactgcgcgagaaccgtcacaaggcgctggttttcagccagttc
gtcgggcacctgcagatcattcgcggctacctgaatcgcgccggcatcccctaccagtac
ctggacggcagcacccccgcgccagagcgcaaactgcgggtggacgcgttccagtccggc
gccggggacctcttcctgatcagcctcaaagccggcggcgtcgggctcaacctgactgcc
gccgactacgtcatccacatggacccctggtggaaccccgcggtggaggaccaggcctcc
gaccgcgcccaccgcatcggtcagcagcgcccggtgaccatctaccgtctcgtcgccaag
ggaaccatcgaagagaagatcgtcggcctgcaccagcaaaagcgcgggctcgccgacagc
ctgctcgatgaaagcgacctctccggcaaggcgagcgtagaggagctcctggcgctgcta
cggtcaggatcttag
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