Geomonas diazotrophica: KP003_08085
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Entry
KP003_08085 CDS
T07937
Name
(GenBank) SpoIID/LytB domain-containing protein
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
gnt
Geomonas diazotrophica
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gnt01011
]
KP003_08085
Enzymes [BR:
gnt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
KP003_08085
Peptidoglycan biosynthesis and degradation proteins [BR:
gnt01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
KP003_08085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
Motif
Other DBs
NCBI-ProteinID:
QXE88344
LinkDB
All DBs
Position
1851628..1852737
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AA seq
369 aa
AA seq
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MSCFRTLIILIICLAAGGSAAAMRPEMVRVALFKGAETLRIDGDGVLLTDGRGEPLRVEM
PLEVRRSGSGLSVNGRAVNRLVASAFSRITINGKGYRALIEVSAADKGLLVVNELPLEEY
LVGLINCEISSAWPIEAIKAQAVIARSYAVYQMQARRGASYQLESSVMDQVYEGADVEDS
RAAYGVRETAGEVLSYNGKTIQAFYHSNCGGHTESSKNVWGLSIPYLQGVSCRYCGDSNP
IRWELNLPLKKVESSLKGAGFQVAGLRELRVRGRNQSGRVQDVVAECSRGSVVIPAVAFR
KALGYGSVKSTNFELRGSRDEVQVIGTGSGHGVGLCQWGAKGRANEGFDYREILTYYYPG
VKLSGGYGR
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcttcaggacgttgatcatattaatcatctgcctcgccgccgggggtagtgcc
gcggcgatgcgaccggagatggtgcgggtggccctgttcaagggggccgagaccctcagg
atcgacggcgacggcgtgctcctgaccgacggccgcggcgaaccgctcagggtggagatg
ccgctcgaggtgcgccgctcggggagcgggctcagcgtgaacggcagggccgtgaaccgc
ctggtcgcctcggcgttttcgcgcatcacgatcaacggcaagggataccgggccctgatc
gaggtctcggccgccgacaaggggctccttgtggtgaacgagcttccgctcgaggagtac
ctggtcgggctcatcaactgcgagatcagttccgcatggcccatcgaggccatcaaggcg
caggccgtcatcgcccgctcctacgcggtgtaccagatgcaggcccgccgcggcgcgagc
taccagctcgagtccagcgtgatggaccaggtgtacgagggggccgacgtagaggacagc
cgggccgcctacggcgtgcgtgagaccgccggagaggtgctcagctacaacggcaagacc
atccaggccttctaccattccaactgcggcggccataccgagtcctccaagaacgtctgg
gggctctcgatcccgtacctccaaggcgtctcctgccgctactgcggcgactccaaccct
atccggtgggaattgaacctccccctcaagaaggtggagagctcgctcaagggcgccggc
ttccaggtggcggggctcagggagctgcgcgtgcgcggcaggaaccaaagcggcagggtg
caggacgtggtcgccgaatgctccagggggagcgtggtcatcccggcggtggcgttcagg
aaggccctcggctacggcagcgtgaagagcaccaacttcgagctgcgcggcagccgcgac
gaggtgcaggtgatcggcaccggttccggtcacggcgtcggcctgtgccagtggggcgcc
aaggggcgcgccaacgaagggttcgattaccgcgagatcctcacttactactatccgggc
gtgaagctctccggcgggtacggtcgatag
DBGET
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