Geomonas diazotrophica: KP003_08665
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Entry
KP003_08665 CDS
T07937
Name
(GenBank) YchF/TatD family DNA exonuclease
KO
K03424
TatD DNase family protein [EC:3.1.21.-]
Organism
gnt
Geomonas diazotrophica
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
KP003_08665
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Motif
Pfam:
TatD_DNase
Radical_SAM
Amidohydro_1
ArnR1-like_WHD
Motif
Other DBs
NCBI-ProteinID:
QXE88449
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Position
complement(1983059..1984438)
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AA seq
459 aa
AA seq
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MELIDSHSHIYGSEYAEDFEEMMDRAREAGVGTIMAVGADLESSREAVALAASRPNIYCS
VGIHPHDAAGVTEADYQAVRELALNNPKVVAIGEVGLDFFRDRSPRTDQEEVFRRFIRMA
RELSLPLIIHDRDAHDRIVAILKEERANEVGGVLHCFSGDLAMAKECIEMNFMISIPGTV
TYPSNEALREVVRGLKIEKLMVETDAPYLTPVPHRGKRNEPAFVRFAAERIAEVKGLSPD
DVGRITSFNTRRLFRIEQAATQEDTIAYKIRNSLYLNITNRCSNRCTFCPKFEELAVKGH
ELKLSHEPNFAEVIAAVDAASGYDEVVFCGFGEPLIRLDLVKEVAAELKRRGLRVRINTD
GQANLVHGRNILPELKGLVDALSVSLNAANAEDYDRLCNTPFGAAGFAGLCDFLREAPKH
VPQVTASAVTVPGLDVEPVRKLALSLGVEFREREYSEVG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatcgacagccattcccacatatacggcagcgagtacgctgaggatttcgag
gagatgatggatcgtgccagggaggcgggagtcggcaccatcatggccgtcggcgcggac
cttgagtcgagccgcgaggccgtcgccctcgccgcttcgcgtccgaacatctactgttcg
gtcgggatccatccccacgacgcggccggcgtgaccgaggcggactaccaggccgtgcgc
gaactcgcactgaacaaccccaaggtggtcgccatcggggaggtcggcctcgatttcttc
cgtgaccgctccccccgcaccgaccaggaggaggtgttccgccgcttcatcaggatggca
cgggagctctcgctgccgctcatcatccacgaccgcgacgcccacgaccgcatcgtcgcc
atactcaaggaggaaagggccaacgaggtgggaggggtgctgcactgcttttccggcgac
ctggccatggcgaaggagtgcatcgagatgaacttcatgatctccatcccgggaaccgtc
acctacccgtccaacgaggcgctcagggaggtggtccgggggttgaagatcgagaagctc
atggtggagaccgacgccccctacctcaccccggtgccgcaccgcgggaagaggaacgag
ccggccttcgtcaggttcgcggcggagcggatcgccgaagtaaaggggctctccccggac
gacgtcggccgcatcacctcgttcaacaccaggaggctgttccggatcgaacaggccgcg
acgcaggaagacaccatcgcctacaagatccgcaattcgctctacctcaacatcaccaac
cgctgctcgaaccgctgcaccttctgcccgaagttcgaggaactcgcggtgaagggacac
gagcttaagctttcgcacgagccgaactttgccgaggttatcgccgccgtcgatgcggct
tcgggttacgacgaggtggtgttctgcgggttcggagagcctttgatcaggctggacctg
gtcaaggaagtggccgccgagttgaaacggcgcggcctgcgggtgaggatcaacaccgac
ggccaggcgaacctggtgcacggccggaacatccttccggagctgaaagggctggtggat
gccctgtcggtgagcctcaacgcggccaacgccgaggattacgacaggctctgcaacacc
cccttcggggcagcgggattcgccggcctctgcgattttctcagggaggccccaaagcac
gtgccgcaggtcacggcgagtgcggtgacggtgccagggctggacgtggagccggtgagg
aaactcgccctgtccctcggggtcgagttccgggagcgggagtactcggaggtcggctag
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