Geomonas diazotrophica: KP003_09065
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Entry
KP003_09065 CDS
T07937
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gnt
Geomonas diazotrophica
Pathway
gnt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KP003_09065 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gnt03400
]
KP003_09065 (mutM)
Enzymes [BR:
gnt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KP003_09065 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KP003_09065 (mutM)
DNA repair and recombination proteins [BR:
gnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KP003_09065 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zf-dskA_traR
NFACT_N
DUF7573
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QXE88526
LinkDB
All DBs
Position
2087550..2088380
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVEVTRLGIKDHLTLARIASVELYIPKLRNMVPEGLSQLLAGQTVRSVERRGKYL
ILDCSAGSLLLHLGMTGHLRLVPASAAPGPHDHFDLRLDSGIVLRLNDPRRFGSIHFAGS
NPLQHQLLRKIGPEPLTDAFAPEYLYRLSRGRKVALQRFLMDSAVVAGIGNIYAAESLFR
CRLHPDTPAGELSPADCAALVAAIKETLATAIATGRSTMDFLKTEERLAYFPQQLYVYGR
EGLPCRECGTPVRRGRLGNRSTFFCAECQPEHRSPR
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttacccgaagtcgaagtcacgcggctggggataaaggaccacctgaccctc
gcgcgcatcgcctcagtcgagctttacatcccaaaactgcgcaacatggtcccggagggg
ctctcccagctcctcgctgggcagacggtccgatcggtggagcggcgcggcaagtacctg
atactcgactgcagcgcaggctcactgctgctgcacctggggatgaccggccacctgcgt
ctggtgcccgcctcggccgcgccggggccccacgaccacttcgacctgcggctcgattcc
ggaatcgtgctccggctgaacgacccgcgccgcttcggctcgatccatttcgccggttcg
aacccgctgcagcaccagttgctccgcaagatcggtcccgaaccgctcaccgatgccttc
gccccggagtacctttaccggctgagccggggcaggaaggtcgccctgcagcgcttcctg
atggacagcgcggtcgtggccggaatcggcaacatctacgccgcggaaagcctctttcgc
tgccggctgcacccggacaccccggcaggggagttgtccccggccgactgtgccgcgctg
gtcgccgccatcaaggagaccctcgccaccgccatcgccaccgggcgctcaaccatggac
tttctgaaaaccgaagagcggctcgcctacttcccgcagcagctctacgtctacgggcgg
gaagggctcccctgccgggaatgcggcacccccgtccgcaggggaagactcggcaaccgc
tccacctttttctgcgcggagtgccagccggagcaccggtcgccacggtga
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