Geomonas nitrogeniifigens: KP003_09440
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Entry
KP003_09440 CDS
T07937
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
gnt
Geomonas nitrogeniifigens
Pathway
gnt00061
Fatty acid biosynthesis
gnt00071
Fatty acid degradation
gnt01100
Metabolic pathways
gnt01212
Fatty acid metabolism
gnt02024
Quorum sensing
Module
gnt_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KP003_09440
00071 Fatty acid degradation
KP003_09440
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KP003_09440
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gnt01004
]
KP003_09440
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gnt04147
]
KP003_09440
Enzymes [BR:
gnt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KP003_09440
Lipid biosynthesis proteins [BR:
gnt01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
KP003_09440
Exosome [BR:
gnt04147
]
Exosomal proteins
Exosomal proteins of breast milk
KP003_09440
Exosomal proteins of breast cancer cells
KP003_09440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Acyltransferase
PP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QXE88597
LinkDB
All DBs
Position
complement(2171186..2173666)
Genome browser
AA seq
826 aa
AA seq
DB search
MRTLVDLFHSFAPRGDDTALVNRTGVRRFAVSYGELSELSMKMAGLLARRGVAAGDRVLL
WGPNSSWWGVAYWGIIMRGAIAVPVDFMSDRGRAESILKLTQAKVVLQSRFKPERLDVPD
SLLLEDLKYLLEDVPPYAEVVHPAPDDIAQLIYTSGTTGNPKGVILTHKNLVANMVQINQ
QVPIITPEFSFLSLLPLSHMFEQMGGFFTPLYRGATVIYPRTLKPSAIMEALGEEDVYVI
MSVPRLMQLLKTTIERELAEKHLSGVFASLAKLGEGLSKPARKKLFFPVQKKFGANFTVF
VSGGAPLDPDVFRFWDAMGFTVLEGYGLSECSPVLCVNTVEKQVAGSVGPPLPGVELRLD
GKEVVVRGDNVFPGYYQNEEATRGAFTEDGWFKTGDLGEIMPDGWLTIKGREKELIVTGS
GVNVYPDELEAVLNKVAGVKESCVIGLDRGAGEEVHAVLLLDDSGAKPDEILARANAQLD
TLHQITGYTIWPEPEFPKTTTLKIRKFQVKEQVKQGAAAGGAGASQDHLVNLLSKVTGTD
AGEIREDSLLVADLGLTSIARLELVNYLEQEFRLDIEDSQIGPQTRVSEVRRIIARREKG
HRRGHYRFWTNTAPVRALRMLGDALLNYPLFRLFVRLEVRGRENVEHLQGPVVFVANHLG
YFDQPSLMFALPREVRYRTATAAWEEFFFGDYHGLERLWRLATYQYGTLFLNLFPLPQTS
GFSAAVKYMGKLTDRGLNTLIFPEGGHSHDGSMQDFQLGLGIIAKELEIPIVPVKIVGTD
KILPPQKTGIPKRGTVTVSFGKPLRFRFEEPAEIVARAQAAVAEIQ
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgcggacactggtagatctttttcatagctttgcaccgcggggggatgataccgccctg
gtgaaccgtaccggggtgcgccgcttcgcggtctcgtacggcgagctctccgagctctcc
atgaagatggcgggcctgctggcgcggcgcggcgtggctgcaggggatcgcgtgcttttg
tggggtccgaactcctcctggtggggtgtcgcctactggggcatcatcatgcggggtgcc
atcgccgttccggtcgacttcatgtccgaccgcggtcgcgcggagtcgatcctgaagctg
acccaggccaaggtggtgctgcaaagccgcttcaagccggagcggctcgacgtcccggat
tccctgctgctcgaggacttgaagtacctgctggaggacgtccccccttacgccgaggtc
gtgcatcccgcgcccgacgacatcgcgcagctcatctacacctcgggcaccaccgggaac
cccaagggggtgatactgacccacaagaacctggtggccaacatggtccagatcaaccag
caggttcccatcatcaccccggagttttccttcctctcgctgctgccgctgtcgcacatg
ttcgagcagatggggggcttcttcaccccgctgtaccgcggcgccaccgtcatctatccg
cgcaccctgaagccttccgccatcatggaggcgctcggcgaggaagacgtctacgtcatc
atgtcggtgccgcgcctgatgcagcttctgaagacgaccatcgagcgcgagctcgcagag
aagcatctctcgggcgtattcgcctcgctcgcgaagcttggggaggggctctccaagccc
gccaggaagaaactcttcttccccgtgcagaaaaagttcggcgccaacttcaccgtcttc
gtctcggggggggcgccgctcgacccggacgtgtttcgcttctgggatgccatgggcttc
accgtgctcgaggggtacggcctttccgagtgctcgccggtcctctgcgtgaacaccgtg
gagaagcaggtggcgggctcggtcgggccgccgctccccggggtagagctgaggctcgac
ggcaaggaggtggtggtcaggggagacaacgtctttccggggtactaccagaacgaggag
gcgacccggggcgccttcacggaggacggctggttcaagaccggcgacctgggcgagatc
atgccggacggctggctcaccatcaaggggcgggagaaggaactgatcgtcaccggcagc
ggggtgaacgtctaccccgacgagctggaggccgtcttgaacaaggtcgccggggtgaag
gagtcctgcgtcatcggcctggaccgcggtgccggagaggaggtgcacgcggtcctgctg
ctcgacgacagcggcgcgaagcccgacgagatcctggcccgggccaacgcccagttggac
accctgcaccagatcaccggttacaccatctggccagagccggagttcccgaagaccacc
acgctgaagatcaggaagttccaggtcaaggagcaggtgaaacagggtgccgccgctggt
ggcgccggcgcgagccaggatcacctggtgaacctcctgtccaaggtgaccggcaccgac
gcgggcgagatcagggaggactccctgctggttgcggacctgggactcacctccatcgcc
cgcctggagctggtcaattaccttgagcaggagttcaggctcgatatcgaggactcgcag
atcgggccgcagaccagggtttccgaggtgcgccgcattatcgcccggcgcgagaagggg
caccggcgcggccattaccgcttctggaccaacacggcgccggtacgcgcgctgcgcatg
ctgggggacgcgctcttgaactaccccctgttccgcctcttcgtgcggctcgaggtgcgc
gggcgcgagaacgtagagcacctgcaggggccggtggtcttcgtcgccaaccacctcggg
tacttcgaccagccttccctgatgttcgcgctccccagggaggtccgctaccgcaccgcg
accgccgcctgggaggaattcttcttcggcgactaccacgggctggaacgtctctggcgg
cttgcaacctaccagtacgggaccctgtttctgaacctgttcccgctgccgcagaccagc
ggcttctccgcagccgtgaaatacatggggaaactcaccgaccggggtctgaacaccctg
atcttccccgagggggggcactcgcacgacggcagcatgcaggactttcagctcggcctt
ggcatcattgccaaggagcttgagattcccatcgtgccggtgaagatcgtcgggaccgac
aagatcctcccgccccaaaagaccggcattcccaagcgcggcacggtgacggtcagcttc
gggaagcctctgcggttccggttcgaggagcccgcagagatcgtggccagggcgcaggcc
gcggtggctgaaattcaatga
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