Geomonas diazotrophica: KP003_11995
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Entry
KP003_11995 CDS
T07937
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
gnt
Geomonas diazotrophica
Pathway
gnt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KP003_11995
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gnt01007
]
KP003_11995
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gnt03016
]
KP003_11995
Enzymes [BR:
gnt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
KP003_11995
Amino acid related enzymes [BR:
gnt01007
]
Aminoacyl-tRNA synthetase
Class I (U)
KP003_11995
Transfer RNA biogenesis [BR:
gnt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
KP003_11995
Prokaryotic type
KP003_11995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
DUF7129
zf-C2HC5
RUBY_RBDX
tRNA-synt_1f
DUF6487
tRNA-synt_1b
NCD3G
DUF7130
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
QXE85119
LinkDB
All DBs
Position
complement(2755051..2757717)
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AA seq
888 aa
AA seq
DB search
MANKELEKVYEPKSVEQKWYQEWEGKGYFHATVPSDKPSYSIVIPPPNITGVLHMGHALN
NTLQDILCRWKRMSGYNVLWMPGTDHAGIATQNVVERQLAAEGKDRFELGREGFIERVWQ
WKGESGGQIIGQLKRLGASCDWERERFTMDAGLSKAVREVFVRLYQEKLIYRDNRLINWC
PRCHTALSDIEVEHEDKAGNLWHLRYPVVGSDEYVVVATTRPETMLGDTAVAVHPEDERY
SHLIGKKVMLPLVNREIPVIGDDYVDREFGTGVVKITPAHDFNDFEMGLRHNLDRINVFD
ESGVVNAAGKQYEGMDRFAARKQVVADLEAAGLLEKIQDHALSVGGCYRCKTVVEPYMSL
QWYVKVGPLAERALGAVKDGRTKIVPQQWENTYYDWMENIRDWCISRQIWWGHRIPAWYC
DHCGHITVAKEDPTACSQCGSDEIRQETDVLDTWFSSALWPFSTMGWPEKTPELSAFYPT
SCLVTGFDILFFWVARMMMMGLHFMDEVPFTDVYIHALVRDAQGQKMSKSKGNVIDPLTV
IDAYGTDAFRFTLAAFAAQGRDIKLAEERIAGYRNFANKIWNASRFAMMNLEGFEPDQVD
VASLKLSNADRWILYRLNEAAGSLDSALTGFRFNEAASELYRFTWSEFCDWYIELAKDDL
YKGDAERQAAAKYVLWLVLENLLRLLHPFMPFITEEIWQALPKKKGAADSIMISDFPTPR
EEWAGYASAAVEMELVMEVIKGIRNIRGEMEVAPSKQIAAILDCKSESSLKLLKKNEVYV
MSLARLSDLAIGQGIERPAEASLQVAGDVEIIVPLKGLVNVEEEEKRLNKEIAKIEKDIE
FLSKKLENPSFIERAPADVVEKEREKIAEFGNKKKLLQESLEKILRLK
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaagagctggaaaaggtttacgagccgaaaagcgttgagcagaagtggtac
caggagtgggaagggaaggggtacttccacgccaccgtcccctcggataagccgagctac
tccatcgtcatcccccccccgaacatcaccggcgtgctgcacatggggcacgccctaaac
aataccctgcaggacatcctgtgccgctggaagcggatgagcggctacaacgtgctctgg
atgccgggtaccgaccacgcgggcatcgcgacccagaacgtggtcgagcgccagctcgcc
gccgaagggaaggatcgcttcgaactgggccgcgaagggttcatcgagcgggtctggcag
tggaagggcgagtcgggcgggcagatcatcggccagctgaaaaggctcggcgcctcctgc
gactgggagcgcgagcgcttcaccatggacgccggtctttccaaggcggtgcgcgaggtg
ttcgtgcgcctgtaccaggagaagctgatctaccgcgacaaccgcctgatcaactggtgc
ccgcgctgccacaccgcgctctccgacatcgaggtcgagcacgaggacaaggcggggaac
ctctggcacctgcgctacccggtggtggggagcgacgagtacgtggtggtcgccaccacc
cgtcccgagaccatgctgggggacaccgccgtggccgtgcaccccgaggacgagcgctac
agccacctgatcgggaagaaggtcatgctccccttggtgaaccgcgagatcccggtcatc
ggggacgactacgtagaccgcgagttcggcaccggtgtggtgaagatcaccccggcgcac
gacttcaacgacttcgagatgggcctcaggcacaacctcgaccgcatcaacgtcttcgac
gagtccggcgtggtaaacgccgccggcaagcagtacgaggggatggaccgcttcgccgcc
aggaaacaggtggtggccgacctcgaggctgccgggcttctcgagaagatccaggatcac
gccctctccgtcggcggctgctaccgctgcaagaccgtcgtcgagccgtacatgtccctg
cagtggtacgtgaaggtgggaccgcttgccgagcgcgccctcggcgccgtcaaggacggg
cgcaccaagatcgtgccgcagcagtgggaaaacacctactacgactggatggagaacatc
cgcgactggtgcatctcgcgccagatctggtggggacaccggattcccgcctggtactgc
gaccactgcggtcacatcaccgtggccaaggaagacccgaccgcgtgcagccagtgcggc
tccgacgagatccgccaggaaaccgacgtgctcgacacctggttctcctcggccctctgg
cccttctccaccatggggtggccggaaaagaccccggagctgtccgccttctacccgacc
tcctgcctggttaccggcttcgacatcctcttcttctgggtggcccgcatgatgatgatg
gggctgcacttcatggacgaggtccccttcaccgacgtctacatccacgccctggtgcgt
gacgcgcaggggcagaagatgtccaagtccaaggggaacgtgatcgatccgctgaccgtc
atcgacgcctacggcaccgacgccttccgcttcaccctggctgccttcgccgcgcagggg
cgcgacatcaagctagccgaggagaggatcgccggctaccgcaacttcgccaacaagatc
tggaacgcatcgcgtttcgccatgatgaacctggaagggttcgaaccggaccaggtcgat
gtggcgtcgctcaagctctccaacgcggaccgctggatcctgtaccgcctcaacgaggct
gcaggttcgttggactcggcgctgaccgggttccgtttcaacgaggcggccagcgagttg
taccgcttcacctggagcgagttctgcgactggtacatcgagttggccaaggacgatctc
tacaagggtgacgccgagcgccaggcggcggcgaaatacgtgctctggctggtgctggag
aacctcctgcgcctcttgcacccgttcatgccctttatcaccgaggagatctggcaagca
ctgcccaagaagaagggcgccgccgattccatcatgatctccgacttcccgaccccgcgc
gaggagtgggcgggctacgcctccgccgccgtcgagatggaactggtgatggaagtcatc
aaggggatcaggaatatcaggggcgagatggaagttgccccgagcaagcagatcgccgcc
atcctcgactgcaagtccgagtcgagcctcaagctgctcaagaagaacgaggtctacgtg
atgagcctcgcccgtctttccgaccttgccatcgggcaggggatcgagcgtcccgccgag
gcctcgctgcaggtggcaggcgacgtcgagatcatcgtgccgctcaaggggctcgtgaac
gtcgaggaagaagagaagcgtctcaacaaggagatcgccaagatcgagaaggacatcgag
ttcctctccaagaaactggagaacccgagcttcatcgagcgtgcgcccgccgacgtggtc
gagaaggagcgcgagaagatcgccgagttcggcaacaagaagaagctcctccaggagagc
ctggagaagatcctgaggctcaagtag
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