Geomonas nitrogeniifigens: KP003_12215
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Entry
KP003_12215 CDS
T07937
Name
(GenBank) alpha amylase C-terminal domain-containing protein
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
gnt
Geomonas nitrogeniifigens
Pathway
gnt00500
Starch and sucrose metabolism
gnt01100
Metabolic pathways
gnt01110
Biosynthesis of secondary metabolites
Module
gnt_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
gnt_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
KP003_12215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gnt04147
]
KP003_12215
Enzymes [BR:
gnt01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
KP003_12215
Exosome [BR:
gnt04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
KP003_12215
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
Alpha-amylase_C
DUF3459
GlgB_N
AMPK1_CBM
DUF5696
Malt_amylase_C
Motif
Other DBs
NCBI-ProteinID:
QXE85160
LinkDB
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Position
complement(2805919..2807733)
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AA seq
604 aa
AA seq
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MSKEITVKEKELKGDRGGGMGATPHAGGVGFRVWAPHATRVSVIGTFNDWDGAKNPLQAE
ENGNWFADVPGAKVGDAYKFLLTTEKGELKRIDPYAREVTGSTGDAVVHDPSFDWGDDFH
LAPWNELVIYELHVGTFNDQEDDNAAAQFDSIAARLGHLKKLGVNAIQIMPVGEFAGDRS
WGYNPAHIFSVELSYGGPLAFKRFVKRAHSQGVAVILDVVYNHLGPNDLDLWQFDGWSEN
GLGGIYFYNDGRSHTPWGETRPNYGQGEVRQFISDNVFMWLKEYHVDGLRYDCTQFIRSV
DGSTENDLPEGWSLLQWLNEQVAQQFPGRITIAEDLQNNSWLTKAVGAGGAGFGSQWDAM
FVHPIRQAVITPDDQARSLASVRDAICYRYNDDAFDRVIYSESHDEVANGKARVPQEINP
GDPKGWYAQKRSTLAAALVFTAPGIPMLFQGQEFLEGEWFRDTVPLDWDQRDEFCGIVRL
YRDLIHLRLNRAGFTRGLCGQFTQVHHLNEEAKVIAFHRWDQGGAGDDVVVVANFFREPQ
EGYVVGFPAEGIWRLRFNSDWQGYSEAFSDHPSSDAGAETGECDGLPCHATVSLGPYSVL
IFSQ
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagagatcactgtcaaggagaaagagctcaaaggggataggggcggggggatg
ggggcaaccccgcacgctgggggagtcggattccgcgtctgggccccgcatgccactcgg
gtatcggtcatcgggacgttcaatgactgggatggcgccaagaaccccctgcaggccgag
gagaacggcaactggtttgccgatgtgcctggggccaaagtcggcgacgcctacaagttc
ctgctcactaccgaaaagggggagctcaagcgcatcgacccctatgcccgcgaggtgacc
ggttccactggcgatgcagtggtccacgatccgagctttgactggggcgacgacttccac
ctggctccctggaacgagttggtcatctacgagctgcatgtcgggactttcaatgaccag
gaggatgacaacgcggctgcccagttcgactcgatcgcggcccgcctggggcatctgaaa
aaactgggagtcaatgccatccagatcatgccggtgggcgagtttgccggcgaccggtcc
tgggggtacaaccctgcccatatcttctccgtcgaactgagctacggaggccctctggcc
ttcaaacgtttcgtcaaacgtgcccatagccaaggggtcgcggtgatcctcgacgtggtg
tacaaccacctgggcccaaacgatctcgatctgtggcagttcgacggctggtccgaaaac
gggctgggcggcatctacttctacaacgacggccggtcccacaccccatggggggagaca
cgccccaattacggccagggcgaggtgcgccagttcatatccgacaacgtgttcatgtgg
cttaaggaataccatgtggacgggttgcgctacgactgcacccagttcatcaggagtgtc
gacgggtcgacagaaaacgaccttccggaggggtggagtcttttgcagtggctgaacgaa
caggtcgcccagcagttccccggccgtatcaccatagccgaggatctgcagaacaacagc
tggctcaccaaggccgtgggtgccgggggcgccggcttcggatcgcagtgggacgccatg
ttcgtgcatcccatacgccaggcggtgataacccccgatgaccaagcacgctcgcttgcc
tccgtccgggacgccatttgttaccgctacaacgacgacgccttcgatcgggtcatctac
agcgaaagccacgacgaggtggccaacggcaaggcccgcgtgcctcaggagataaatccc
ggggaccccaagggatggtacgcccagaaacgctctaccctggccgccgccctagtcttt
acggctcccggcataccgatgctgttccaggggcaggagtttctcgaaggggaatggttc
cgcgacacggtcccgctggactgggatcagcgcgacgagttctgcggcatcgtccggctc
taccgggaccttatccatctgcgactcaaccgcgccggtttcacccgcggcctgtgcggg
cagttcacccaagtgcaccacttgaacgaggaggccaaggtcatcgccttccaccgctgg
gaccagggaggagctggagacgacgtcgttgtggtcgccaatttcttcagagaaccgcag
gagggatacgttgtcggctttccggccgaagggatctggaggttgcgcttcaacagcgat
tggcaggggtacagcgaagccttctctgatcatccgagcagcgacgccggtgccgaaacg
ggcgagtgcgacggactcccctgtcacgccacagtttctctggggccctacagcgtgctg
atcttttcccagtga
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