Geomonas nitrogeniifigens: KP003_12235
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Entry
KP003_12235 CDS
T07937
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
gnt
Geomonas nitrogeniifigens
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gnt03000
]
KP003_12235
Transcription factors [BR:
gnt03000
]
Prokaryotic type
Helix-turn-helix
Other families
KP003_12235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
AAA_2
HTH_8
PAS_4
PAS
AAA_16
PAS_9
THOC7
PAS_8
AAA_3
AAA_22
MCM
AAA_19
AAA_7
TsaE
NACHT
Rootletin
Motif
Other DBs
NCBI-ProteinID:
QXE88887
LinkDB
All DBs
Position
2810696..2812345
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AA seq
549 aa
AA seq
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MLRLVQQLEIHQIELESQNEELRRAREALEVSRNSYAELYDFAPAGYFTFDVNGVIRQVN
LTGANLLGVERHLLVDTPFTRYIADAQGRELFPRHLANVAQNSSLQQCEIRLKGKGDSIV
YTQFRSVRVDDSSSSHIRIFCSVVDGTIARRLKEDLQKSHDNFESTVSERTGELARANQM
LAREVEERKKTEESLQDACSEIKRLKDRLQAENIYLQQEVARQYNSCEIIGQSEALSQVM
ARIEQVAPMDATVLLQGETGTGKGMAARAIHRSSARRERPMITVNCTTLPATLVESELFG
REKGAFTGAFARQIGRFELADGGTIFLDEIGDLPLELQSKLLRVIQDGEFERLGANHTIK
TDVRIIAATNRNLEQEIRTGRFREDLYYRLNVFPISMPPLRQRSEDIPLLVDFFLAKFNK
KIGREITTVPSETMRTLQKYHWPGNVRELESVIERAVITSQGSTLQVLDQFNNFRMKEDA
ANNTGQTSNEEREGGEDIKTLVDLERDYILGVLLKTGWRIEGASGAAGILGLNASTLRAR
MRKFGIIRK
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggcttgttcagcagcttgaaatccaccagatcgaacttgaatcgcagaacgag
gagttgcgccgggccagagaagcgcttgaggtctcgcgcaacagctacgcagaactctac
gactttgcccccgcaggctatttcaccttcgatgtcaacggggtgattcggcaggtaaac
cttaccggcgccaatctattgggggtggaacggcacctgctggtagacacgcccttcacc
cggtatatcgccgacgcacaaggaagggagcttttcccccggcacctggcaaatgtcgcc
cagaattcgagtctacagcagtgtgaaatcaggctcaaagggaaaggcgattctatcgtc
tacacccagtttcgcagcgtcagggtcgacgacagcagcagctcgcatatccgtatcttt
tgctcggtggttgacggtaccattgccaggcgcctgaaggaggacctgcaaaagtctcat
gacaatttcgagtcaaccgtgtcggagaggaccggagaactggcgagggcaaatcagatg
ctcgcacgggaagttgaggaacgcaagaagacggaggagtcgctccaagatgcctgttcc
gagataaagcgtctgaaggaccggctccaggccgaaaacatctacctgcagcaagaggtt
gcccggcagtacaacagctgcgagattatcggacaaagcgaagccctttcgcaggtaatg
gcccgtatagaacaggtagcccccatggatgcgacggttctcctgcagggcgagaccggt
accggcaagggaatggcggcgcgggccatccacagaagctctgcccgcagagagcgcccc
atgataacggtcaactgcactacgctgccggctacccttgtagagagcgagcttttcggg
cgggaaaagggggctttcactggggcttttgcaaggcagatcgggcgcttcgaactggcc
gacggcggcaccatattccttgacgaaatcggcgatttgccgcttgagttgcaaagcaaa
ctgctcagggtcatccaggacggggagttcgagcgattgggcgccaaccataccattaag
accgatgtacgtatcatcgcggctaccaaccgaaatctggaacaggaaatccggaccggc
aggttccgggaagacctctactaccggctcaacgtatttccgatctcgatgccaccactt
aggcagcgcagtgaagacataccgctgctggttgattttttcctcgccaagttcaacaag
aaaatcggcagggagatcacaaccgtaccgagtgagaccatgcgtaccttgcagaaatac
cactggcccggcaacgtgcgggaattggagagtgtaatcgagcgggcggtaatcacaagc
caagggagcacgctgcaggtactggaccagttcaacaatttccgcatgaaagaggatgca
gcaaataacacagggcagacatcgaatgaagagagggaggggggggaagatatcaaaacc
ctcgtcgatctggaacgcgactacatcctcggtgtgctgctgaaaacaggttggcgcatc
gagggagccagtggcgcggcagggatactcggactcaatgccagcaccctgcgcgcccgt
atgcggaaattcggaatcatccgtaaatag
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