Geomonas nitrogeniifigens: KP003_13115
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Entry
KP003_13115 CDS
T07937
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
gnt
Geomonas nitrogeniifigens
Pathway
gnt00250
Alanine, aspartate and glutamate metabolism
gnt00310
Lysine degradation
gnt00350
Tyrosine metabolism
gnt00650
Butanoate metabolism
gnt00760
Nicotinate and nicotinamide metabolism
gnt01100
Metabolic pathways
gnt01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
KP003_13115 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
KP003_13115 (gabD)
00310 Lysine degradation
KP003_13115 (gabD)
00350 Tyrosine metabolism
KP003_13115 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
KP003_13115 (gabD)
Enzymes [BR:
gnt01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
KP003_13115 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
KP003_13115 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
KP003_13115 (gabD)
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GFIT
Motif
Pfam:
Aldedh
DUF1487
NAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
QXE88896
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Position
complement(3018200..3019654)
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AA seq
484 aa
AA seq
DB search
MILKDKSLFQQLCFINGAWGGADSGDTVDVINPATGEKLGTVPKMGGAETRRAIEAAHAA
LPAWRARTAQERSVIVRRWSELLLEHQDDLAVLMTAEQGKPLAEARGETVYAASFLEWFA
EEGKRIYGDVIPSHQNDKRIVVLKEPVGVCVAITPWNFPSAMITRKAAPALAAGCTMVVK
PATATPYSALALAELARRAGVPAGVFSVITGSAASIGGEMTANPLVRKLTFTGSTDVGKK
LMAQCAGTVKKVSLELGGNAPFIVFDDADLDAAVEGAVISKYRNAGQTCVCSNRFLVQDG
IHDRFAERLTQAVAGLKVGDGLKGETQQGPLIDMAAVEKVEEHIADAVAKGARVVIGGKR
HALGGSFFEPTVLTGVTPDMLLAREETFGPVAPLFRFHTEEEVIQLANATEFGLAAYFYS
RDMARVWRVAEAVEYGIVGINTGLISTAVAPFGGMKESGVGREGSKYGIDEFLEVKYLCI
GGIT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
ctgattctcaaggacaaaagtcttttccagcagctttgctttatcaacggcgcctggggc
ggggccgatagcggcgataccgtcgacgtcatcaacccggccaccggagaaaagctgggc
accgttcccaagatgggaggcgccgagacccgccgcgccatcgaggcggcccatgccgcg
ttgccggcctggcgcgccaggactgcccaggaacgctctgtgatcgtaaggcggtggtcc
gaactgcttctggagcatcaggacgacctcgccgtgctgatgaccgcggagcagggaaag
ccgcttgccgaggcccgcggcgagacggtgtacgccgcctcgttcctggaatggttcgcc
gaggaggggaagaggatctacggtgatgtcatcccttcgcatcaaaatgacaagcgcatc
gtggtcctcaaggagccggttggtgtctgcgtcgccatcaccccctggaatttcccctcc
gcaatgatcaccaggaaggctgcacccgcgcttgccgcaggctgtaccatggtggtgaag
cctgccaccgcgaccccatattcggcgctggccctggccgagttggcgcggcgagcggga
gtgccggcgggggtgttctcggtgatcaccggctccgctgccagcatcggcggggagatg
accgccaacccgctggtccgcaagctcacctttaccggctccaccgacgtcggcaagaag
ctgatggcgcagtgcgcggggacggtcaagaaggtgtctcttgaactcggcggcaacgca
cccttcatcgtcttcgacgacgccgacctggatgccgccgtcgagggtgcggtcatttcc
aagtatcgcaacgccggtcagacctgtgtctgctcgaaccggttcctggtgcaggacggc
atccatgaccgcttcgccgaaaggcttacgcaggccgtcgccgggttgaaggtgggggac
gggctgaagggtgagacccagcaggggccgctcatcgacatggctgcggtggagaaagtc
gaggagcacatcgctgacgccgttgccaagggggcgcgggtcgttatcggcggcaagcgg
catgcgctgggaggttccttcttcgagccgaccgtgctcaccggcgtgacgcccgacatg
ctgctcgccagggaagagaccttcggtcctgtggcaccgctgtttcggttccataccgag
gaggaggtgatccaactggcgaacgccacggagttcggcctggccgcctacttctacagc
cgcgacatggcgcgggtctggagggtggccgaagcggtggagtacggcatcgtcggcatc
aacaccggcctcatctccaccgcggttgctccctttggcggcatgaaggagtccggcgtc
ggccgggaaggttccaagtacggcatcgatgagttcctggaagtgaagtacctttgcatc
ggcggtataacgtag
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