Geomonas diazotrophica: KP003_13300
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Entry
KP003_13300 CDS
T07937
Symbol
dxs
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
gnt
Geomonas diazotrophica
Pathway
gnt00730
Thiamine metabolism
gnt00900
Terpenoid backbone biosynthesis
gnt01100
Metabolic pathways
gnt01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
KP003_13300 (dxs)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
KP003_13300 (dxs)
Enzymes [BR:
gnt01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
KP003_13300 (dxs)
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
TPP_enzyme_C
Transketolase_N
PFOR_II
E1_dh
Transketolase_C_1
DUF6446
Motif
Other DBs
NCBI-ProteinID:
QXE85363
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All DBs
Position
complement(3054229..3056166)
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AA seq
645 aa
AA seq
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MPSILDGITDPSQLKALSLRELETLAEELRARIIETCAANGGHVAPSLGVVELTIALHRV
FDSPKDKIVWDVGHQAYAHKLLTGRKERFGTLRTRGGISGFPKRAESAHDCFDVGHSSTS
ISAGVGFAVARDLKKGRNKVLAVIGDGAMTGGLAFEGLNHAGELNKDLVVILNDNEMSIS
ENVGALSNLLSRTITSEYVHRAKKDLEAFLEGVPMFGKSVLKIAKRAEESLKTLFTPGML
FEAFGFEYIGPIDGHDIPKLLETLENVKRFDDAVLIHVLTRKGKGYPPAEANPSLFHGVG
PFDIKTGKVHKGKGGAASYTGVFGETVKRLAQEDERIVAITAAMPDGTGLTPFAKEFPER
FFDVGIAEQHAITFAAGLAAEGFKPVVALYSSFLQRGFDQLCHDVCLQELPVVFAIDRAG
VVGSDGPTHHGVFDLSYLRALPGLTVMAPKDENELQHMLMTALSLEGPAALRYPRGNGLG
VPMDQLLAPLPIGKGERLKDGRDGAIIAVGTMVEPAREAAAALSGEGIEVAVMNARFVKP
LDAELILELARTGLLITVEDNVVQGGFGTAILELLEQYEMTGVRVVRLGYPDSFVEQGEQ
ADLKAAYGLDAAGIARSVREACQGLRAPAPAKRSEQPAVPEQPHA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcccagtatccttgacggcatcaccgacccgagtcaattgaaggcgctctcgctgcgc
gagctcgagacgctcgccgaagagctgcgcgcgcgcatcatcgagacctgtgccgccaac
ggcggacacgtggccccgagcctgggtgtcgtcgagctcaccatcgcgctgcaccgggtc
tttgattcccccaaggacaagatcgtctgggacgtcgggcaccaggcctacgcccacaag
cttttgaccggcaggaaggagcgcttcggcaccctgcgcacccgcggggggatcagcggc
ttccccaagcgggccgagtcggcccacgactgcttcgacgtcgggcactcctccacctcc
atctccgccggggtcggcttcgccgtggcgcgcgacctgaaaaaggggcgcaacaaggtg
ctggcggtgatcggcgacggcgccatgaccggcggcctcgccttcgaggggctgaaccat
gcgggtgagcttaacaaggacctggtggtgatcctgaacgacaacgagatgtccatctcg
gagaacgtcggcgccctctccaacctcctctcgcgcaccatcaccagcgagtacgtgcac
cgcgccaagaaggacctggaggccttcctggagggggtccccatgttcgggaagtcggtg
ctgaagatcgccaagcgggcggaggagtcgctcaaaaccctgttcacgcccgggatgctc
ttcgaggcgttcggcttcgagtacatcggccccatcgacggtcacgacataccgaaactt
ctggagacgctggagaacgtgaagcgcttcgacgacgcggtgctgatccacgtgctgacc
aggaaggggaaggggtatccccccgccgaggcgaacccgtcgctgttccacggcgtcggt
ccgttcgacatcaagaccgggaaggtgcacaagggaaaggggggcgccgcctcctacacc
ggcgtcttcggcgagaccgtgaaacggctggcccaggaggacgagcgcatcgtcgccatc
accgccgccatgcccgacggcaccggcctcaccccgttcgccaaggaattccccgagcgc
ttcttcgacgtggggatcgcggagcagcacgcgatcaccttcgccgccgggcttgccgcc
gaaggattcaagccggtggtcgccctctactcctccttcctgcagcgcggtttcgaccag
ctctgccatgacgtctgcctgcaagaactcccggtggtgttcgccatcgaccgcgccggc
gtggtcggcagcgacggccccacccaccacggcgtcttcgacctctcctacctgcgcgcg
ctccccggcctcacggtgatggcccccaaggacgagaacgagctgcagcacatgctgatg
acggccctctccctggaaggtccggcggcgctgcgctacccgcgcggcaacggcctgggg
gtcccgatggaccaactcctcgcaccgcttcccatcgggaaaggggagcggttgaaggac
ggcagggacggcgccatcatcgcggtcggcaccatggtcgagccggcacgcgaggcagcg
gcggccctctccggcgaggggatcgaggtcgccgttatgaacgcccgcttcgtgaagccg
ctcgacgccgagctcatcctggagctggcccggaccggcctcttgatcacggtggaagac
aacgtggtgcagggcggcttcggcaccgccatcctggaactcctcgaacagtacgagatg
accggggtccgggtggtgcgccttggctatccggactctttcgtggaacagggggagcag
gccgacctgaaggccgcctacggcctcgacgccgccggtatcgcccgttccgtccgcgag
gcctgccaagggctccgggctcccgcgccggccaagcggtcggaacagccggccgtcccg
gaacagccgcatgcctga
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