Geomonas nitrogeniifigens: KP003_13305
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Entry
KP003_13305 CDS
T07937
Name
(GenBank) polyprenyl synthetase family protein
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
gnt
Geomonas nitrogeniifigens
Pathway
gnt00900
Terpenoid backbone biosynthesis
gnt01100
Metabolic pathways
gnt01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
KP003_13305
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gnt01006
]
KP003_13305
Enzymes [BR:
gnt01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
KP003_13305
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
KP003_13305
2.5.1.29 geranylgeranyl diphosphate synthase
KP003_13305
Prenyltransferases [BR:
gnt01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
KP003_13305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
QXE85364
LinkDB
All DBs
Position
complement(3056167..3057051)
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AA seq
294 aa
AA seq
DB search
MDLKEYLKQKCQLVDQALERYLPDAKELPASLHGAMRYSVFAGGKRVRPVLMLAACEAVG
GSADAVMPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDALLTE
AFILLSNGAGGDPAARLRVIQEIAVASGSRGMVGGQVVDMESEGRHDVDLATLSYIHTHK
TGALIRASVRCGTILGGASEEQFKSLTRYADAIGLAFQIADDILDVEGTTEELGKDAGSD
QARGKATYPALMGLEASKARAQELVQIALDALASFDERAEPLRAIASYIVKRKS
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggatcttaaggaatacctgaagcagaagtgccagctggtcgaccaggcgctggagcgc
taccttcccgatgccaaggagctcccggcatccctgcacggcgccatgcgctactcggtt
ttcgccggcggcaagcgcgttcgcccggtgctcatgctggcggcctgcgaggccgtgggc
ggctccgcggatgcggtcatgccggcggcctgcgccatggagatgatccacacctactcg
ctgatccatgacgaccttcccgccatggacaacgacgacttccgcaggggaaaccccacc
aaccataaagtatatggcgaggcgaccgccatcctggccggcgacgccctgttgaccgag
gccttcatcctgctctccaacggcgccgggggagaccccgctgcgcggctcagggtgatc
caggagatcgccgtcgcctccggctcgcgcggcatggtaggcgggcaggtggtcgacatg
gaaagcgaggggcgccacgacgtcgacctcgccacgctctcctacatccacacccacaag
accggcgccctgatccgggcctcggtccgctgcggcaccatcctgggcggggcgagcgag
gagcagttcaagtccctcacccgttacgctgacgccatcggcctcgccttccagatcgcc
gacgacatcctcgacgtcgaggggaccaccgaggagctggggaaggacgccggcagcgac
caggcccgcggcaaggcgacctaccccgctctgatgggtctggaggcgtccaaggcgcgc
gcccaggagctggtgcagatcgccctcgacgcgctcgcctccttcgacgaacgggcggag
ccgctgcgcgccatcgcctcctacatcgtgaaaaggaaatcttaa
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