Geomonas nitrogeniifigens: KP003_13530
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Entry
KP003_13530 CDS
T07937
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
gnt
Geomonas nitrogeniifigens
Pathway
gnt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KP003_13530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gnt02000
]
KP003_13530
02044 Secretion system [BR:
gnt02044
]
KP003_13530
Transporters [BR:
gnt02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
KP003_13530
Secretion system [BR:
gnt02044
]
Type I secretion system
Adhesin protein transporter
KP003_13530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Peptidase_C39
AAA_21
SMC_N
CclA_1
Zeta_toxin
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QXE85406
LinkDB
All DBs
Position
3113860..3116034
Genome browser
AA seq
724 aa
AA seq
DB search
MPETENLTQETEWNVGEDSDRHDDPLLDSLLLVAKLHGLPASRTGLTAGLPLVQNRVTVE
LFPRCAERAGLSSRLVKRPLERISQLQLPAILLLHNRQACAVVERLPESDSFKILLPEAG
TGEKTLTRAELEKLYTGFAVFVRPRYRIGKSTSVTREDGKGNWFWGAITSSWRIYRDVLI
ASFLINVFALVSTFYILNVYDRVIPNSAYETLWVLSIGVTVVYLFSVLMQGLRGYFVDEA
GKKANLKISSLLLQRVLNLRLEARPQSIGSFSNNLREFETILDFITSFSITAVIDLPFVI
LGLVVIWYIGGGAILTIFLVSIALMLIYSACIQAPLRRAVENTFAASSQKNAILVEGLAG
LETVKMLGAESHVQRSWEDAVSYISTWSARSRFLSSSVSNVSYLVQNLAVVALVIAGVYA
IALRELTQGGLVALVILSRQVVAPVAQVANLATRYHRAKEAYRALDDIMKLPVERPAGKT
FLHRPRFKGGIGVKALFFAYPGQTVNALNNISLQIAPGEKVGVIGPIGSGKTTLGKLLLG
LFEPASGMVTMDDTDLRQIDPAELRHYVGYVPQDISLFKGTVRENLTLGAADIDDHAIMR
AAELAGVGEFVKKHPMGFDMEVGEFGRGLSGGQRQCVAIARALLLDPPVLVFDEPTSNMD
SRAELKLKNNLAAGAQEKTMVLITHRASLLELVDRIIVIDNGAVIADGPKATVLEALQRG
HLNI
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
gtgccagagactgaaaaccttacccaagaaacagagtggaatgtcggcgaggacagcgat
cgccacgacgacccccttctcgactcgctccttttggtagccaagctgcacgggctgccg
gcatcgcggacggggctgaccgccgggctccccctggtgcaaaaccgcgtgacggtcgag
ctgttcccccgctgcgccgagcgcgccgggctctcctcccgcctggtgaagcgtcccctt
gagcggatctcccagctgcagctccccgccatcctgcttttgcacaaccggcaggcgtgc
gcggtggtcgagcggctcccggagtcggacagcttcaagatcctgctcccggaggcgggg
accggcgagaagacgttgacccgcgccgaactggagaagctctacacaggcttcgccgtc
ttcgtccgccccaggtaccgcatcggcaagtcgaccagcgtgacccgcgaggacgggaaa
gggaactggttctggggggcgatcacctcatcctggcgcatctaccgcgacgtcctgatc
gcctccttcctgatcaacgtcttcgccctggtcagcaccttctacatcctgaacgtctac
gaccgggtcattccgaacagcgcctacgagaccctctgggtcctctccatcggcgtcacc
gtggtgtacctgttcagcgtgctgatgcaggggctgcgcggctacttcgtcgacgaggcg
ggcaagaaagccaacctgaagatctcctcgctgctgttgcagcgggtgctgaacctccgc
ctggaggcgcgcccgcagtcgatcggctccttctccaacaacctgagggaattcgagacc
atcctcgacttcatcacctccttctccatcaccgccgtcatcgacctcccgttcgtcatc
ctgggtctggtggtgatctggtacatcggcggtggcgccatcctgaccatcttcctggtg
agcatcgctctcatgctgatctactccgcctgcatccaggcgccgctgcgccgggccgtg
gagaacacgttcgccgcatcgagccagaagaacgccatcctggtcgaggggctcgccggg
ctggagacggtgaagatgctcggtgcggagagccacgtgcagcggagctgggaggacgcc
gtcagctacatctccacctggagcgcgcgctcccgcttcctctcctcctcggtgagcaac
gtctcctacctggtacagaacctcgccgtggtcgccctggtcatcgccggggtctacgcc
atcgccctgcgcgaactgacccagggggggttggtggcgctggtgatcctgtcccggcag
gtggtggcgccggtggcccaggtggccaacctcgccacccgctaccaccgggccaaggag
gcctaccgggccctggacgacatcatgaagctcccggtggagcgccccgccggcaagacc
ttcctgcaccgcccccgcttcaaggggggaatcggggtgaaggcgctcttcttcgcctat
cccggacagacggtcaacgcgctgaacaacatctccctgcagatcgccccgggcgaaaag
gtcggcgtcatcggccccatcggctccggcaagaccacgctcgggaagctccttttgggc
ctcttcgagccggccagcggcatggtcaccatggacgacacggatctccggcagatcgac
ccggcagagctgcggcactacgtggggtacgtcccgcaggacatctcgctgttcaagggg
acggtgcgcgagaacctgaccctgggggctgccgacatcgacgaccacgccatcatgcgc
gcggcggagcttgccggcgtcggggagttcgtcaagaagcaccccatggggttcgacatg
gaagtcggcgagttcggccgcgggctctccggcggacagcgccagtgcgtggccatcgca
cgggcgcttctgctcgacccgccggtgctggtcttcgacgaaccgaccagcaacatggac
agccgggccgagttgaagctcaagaacaacctggcggccggcgcccaggaaaagaccatg
gtcctgatcacgcaccgcgcctcgctcctggaactcgtggaccgcatcatcgtgatcgac
aacggcgccgtgatcgccgacggacccaaggcgacggtcctcgaagcgctgcagcgcggg
cacctgaacatctag
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