Geomonas nitrogeniifigens: KP003_15810
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Entry
KP003_15810 CDS
T07937
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
gnt
Geomonas nitrogeniifigens
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gnt03019
]
KP003_15810 (rapZ)
Messenger RNA biogenesis [BR:
gnt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KP003_15810 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_33
AAA_18
AAA_29
AAA_22
AAA_28
AAA_16
nSTAND3
KTI12
DUF815
APS_kinase
ABC_tran
Rad17
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QXE85819
LinkDB
All DBs
Position
complement(3621040..3621903)
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AA seq
287 aa
AA seq
DB search
MRIVIITGLSGSGKSTAVKALEDEGFFCLDNLPVSLVSTFIELVEHSREDIKDVALVMDI
RSRDFIKGYDQVFQSIASAGHSVKIFYFDATDEVLIRRFSETRRRHPALEGASVPEGIRF
ERDQLAGLRRIATAIIDTSEMNVHRLKEVVIGLVKGGEGALEMQVNLQSFGFRYGLPLES
DLVMDVRFLPNPYFVAELRPYSGLEPGVRDYVLKQKETMVFLERFRDMLEFLLPGYRREG
KSYLSVSIGCTGGRHRSVAIAEELYHYFRQRNVNIKISHRDIEKGLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgtcatcataaccggcctctccggatcggggaaatcgacggcggtgaaggcg
ctggaggacgaggggttcttctgcctggataacctcccggtctccctggtgagcactttc
atcgagcttgtggagcactcccgcgaggacatcaaggacgtggcactggtgatggacatc
aggagccgcgacttcatcaaggggtacgaccaggtcttccagtccatcgcctcggccggg
cacagcgtcaagatcttctacttcgacgccaccgacgaggtcctgatccggcgcttctcc
gagacccgccgccgccacccggcgctggagggggcgagcgtccccgaggggatccgcttc
gagcgcgaccagctggctgggctgcggcgcatcgccaccgcgatcatcgacacctcggag
atgaacgtgcaccgcctgaaggaggtggtgatcgggctggtcaaggggggcgagggggcc
ctggagatgcaggtgaacctgcagtccttcggcttccgctacgggctccccctggagagc
gacctggtcatggacgtgcgctttctccccaacccgtacttcgtggccgagctgcgcccc
tattccggcctggagccgggggtgcgtgactacgttttgaagcagaaggaaaccatggtg
ttcctggaacgtttccgggacatgctggagttcctgctgcccgggtaccggagggagggg
aagtcctacctctccgtttccatcggctgcaccggcggcaggcaccgctcggtggccatc
gcagaagagctgtaccactacttccggcaacggaacgtgaacattaaaatttctcacaga
gatatagagaaggggctgggatga
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