Geomonas nitrogeniifigens: KP003_16040
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Entry
KP003_16040 CDS
T07937
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
gnt
Geomonas nitrogeniifigens
Pathway
gnt00500
Starch and sucrose metabolism
gnt01100
Metabolic pathways
gnt01110
Biosynthesis of secondary metabolites
Module
gnt_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
KP003_16040 (glgX)
Enzymes [BR:
gnt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
KP003_16040 (glgX)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
MAT1-1-2
Motif
Other DBs
NCBI-ProteinID:
QXE85859
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All DBs
Position
complement(3668593..3670725)
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AA seq
710 aa
AA seq
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MARTTGRAGTRNGELPKGNTSPLGATVTRGGVNFSVFARDCTGVELLLFDDANDATPSRV
ISLDPKCNRTYHYWHIFVPGIGPGQLYGYRVAGPFEPQRGRRFDPGKVLIDPYGRAVAVP
DGYRRGDACLPGDNAKSAMKSVVADPRGYDWEGDLPLKRPYTKTVIYEMHVAGFTKHPSS
GVAEGKRGTYAGLVEKIPYLKDLGVTAVELLPVFQFDPLDAPLGLRNFWGYSPVSFFAPH
AAFSSKKGPLGPLDEFRDMVKALHKAGIEVILDVVYNHTSEGDHKGPTFCFRGFANDVYY
SLAADGSYINHTGCGNTLNANHHVVRRLIIDSLHYWVKEMHVDGFRFDLASILSRDGQGR
PLKNPPILWDIESDPALAGIKLIAEAWDAGGLYQVGSFIGDSWKEWNGEFRDDVRRFLKG
DEGVVSRFAARMLASPDIYGHQEREPEQSINFVTCHDGFTLNDLVSYNKKHNEANGEQNR
DGSDANLSWNCGVEGPTSDPAIEALRNRQVKNFMAVTLLALGTPMILMGDEMRRTQRGNN
NAYCQDNELGWFDWDGLAVHPGIYRFTRELIRARLRQGDTSSETLTLNQLLGQARLEWHG
VHLGTPDWSYQSHSIALTVWSASKHLVFHYMVNAYWEPLSFTLPPPRRLPGGAWHRWIDT
SLASPDDITPWDAIPVVDGDSYRLPPRSLVVLVATRHPRNSSRPVAPAAP
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaacgactggaagagcaggcacgagaaacggcgagcttcccaagggaaatacc
tcgccgctgggcgccacggtgacccggggaggggtgaacttcagcgtcttcgccagggac
tgcaccggggtagaactgctcctcttcgacgacgccaacgacgccaccccctcccgcgtc
atctccctcgatcccaagtgcaaccgcacctaccactactggcacatcttcgtccccggt
atcggcccgggccagctctacggctaccgcgtggccggccctttcgagccgcaacgggga
cggcgcttcgatccggggaaggtgctcatcgacccctacggccgcgccgtcgccgttccc
gacgggtaccgccgtggcgacgcctgccttcccggcgacaacgcgaagagcgccatgaag
agcgtggtggcggacccgcgcggctacgactgggaaggggacctgccgctcaagcgcccc
tacacgaagacggtcatctacgagatgcacgtggccggcttcaccaagcacccctcctcc
ggcgtcgccgaaggaaagcgcggcacctacgccggcctcgtggaaaagattccctacctg
aaggatctcggcgtcaccgccgtggaactcctcccggtattccagttcgacccgctcgac
gcccccctggggctgcgcaatttctggggctacagcccggtctccttcttcgcgccgcat
gccgccttcagctccaagaaggggccgctggggccgctggacgagttccgcgacatggtc
aaggcgctgcacaaggcgggcatcgaggtgatcctggacgtggtctacaaccacacctcg
gagggggatcacaaaggccccaccttctgtttccgcggcttcgccaatgatgtctactac
tccctcgccgccgacggaagctacataaaccataccggctgcggcaacacgctgaacgcc
aaccaccacgtggtgcgccggctgatcatcgattccctgcactactgggtcaaggagatg
cacgtcgacggcttccgtttcgacctcgcctccatcctctcccgcgacggtcaggggcgt
ccgctcaagaaccctcccatcctctgggacatcgagtccgatcctgcgctggcggggatc
aagctcatcgccgaggcctgggacgccggcggcctgtaccaggtggggagcttcatcggc
gacagctggaaggagtggaacggcgagttccgcgacgacgtgcgccgcttcctcaagggg
gacgagggggtggtgtcccgctttgcggccaggatgctggcaagccccgacatctacggc
caccaggagcgcgagcccgagcagagcatcaacttcgtcacctgccacgacggcttcacc
ctcaacgatctggtctcctacaacaaaaagcacaacgaggccaacggcgagcagaaccgg
gacggctccgacgcgaacctgagctggaactgcggcgtcgagggaccgacgtcggacccg
gccatcgaggcgttgcgcaaccgtcaggtgaagaacttcatggcggtcaccctgctcgcg
ctggggactccgatgatcctgatgggggacgagatgcgccgcacccagcgcggcaacaac
aacgcctactgccaggacaacgagctggggtggttcgactgggacgggctggcggtccac
ccgggcatctatcgattcaccagggagctgatcagggcgcggctcaggcagggcgacacc
tcctcggagacgctcacgctaaaccagctcctcgggcaggcgcgccttgagtggcacggc
gtccacctcggcaccccggactggagctaccagtcgcacagcatcgccctcaccgtgtgg
agcgcctcgaaacacctggtgttccattacatggtcaacgcctactgggagccgctcagc
ttcaccctccccccgccgagaaggcttcccggcggcgcctggcaccgctggatcgacacc
tcgctggcatcccccgacgacatcaccccctgggacgcgatcccggtggtcgacggcgac
agctaccggctcccgccgcgcagcctggtggtgctggtggcaacgcgtcacccgagaaat
tcctcccggccggttgccccggccgctccgtga
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