Geomonas diazotrophica: KP003_16100
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Entry
KP003_16100 CDS
T07937
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gnt
Geomonas diazotrophica
Pathway
gnt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KP003_16100 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gnt03400
]
KP003_16100 (ung)
Enzymes [BR:
gnt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KP003_16100 (ung)
DNA repair and recombination proteins [BR:
gnt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KP003_16100 (ung)
Prokaryotic type
KP003_16100 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QXE85870
LinkDB
All DBs
Position
complement(3682199..3682891)
Genome browser
AA seq
230 aa
AA seq
DB search
MSTESQIRLEPSWKCCLLDEFEKPYMRDLREFLRKEMSKRKVIYPKGSEYFNALNSTSFD
KVRVVILGQDPYHGPDQAHGLCFSVPHGVETPPSLVNIFKEIQADLGLAPADFRHGHLRA
WADQGVLLLNSVLTVEAGRAASHQGRGWEVFTDRVIALLNEKKEHVVFMLWGAYAQKKGA
VIDDARHLVLRAPHPSPLSAHRGFLGCRHFSKANAYLVQHGLDPIDWRLS
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacagaatcgcagatacggttggagccgagttggaaatgctgtcttctggacgag
tttgagaaaccctacatgcgggacctcagagagttcctgcgcaaggagatgtccaagcgg
aaggtgatctatccgaaagggagtgaatacttcaacgccctgaactccacttccttcgat
aaggtcagggtcgtcatcctgggccaagacccctatcatgggccggaccaagctcacgga
ctctgcttttctgtgccgcacggcgtcgaaacgcccccctctctggtgaatatattcaaa
gagatacaggcagatctggggcttgcgccggctgatttccggcacggccacctcagggct
tgggccgaccagggcgttttgctcctcaacagtgttctgaccgtcgaggcagggagggct
gcgtcacaccaggggagagggtgggaggttttcacggaccgggtgattgccctcttgaac
gagaagaaggagcacgtcgtattcatgttgtggggagcctacgctcaaaaaaaaggagcc
gttatcgatgatgcacggcacctggtcctgcgcgcaccgcatccttcaccgctgtcggcg
caccgtgggttcctaggttgccgacatttctcaaaggcaaacgcctaccttgtgcagcat
ggcttggacccgatcgactggcgcctgtcctga
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