Geomonas diazotrophica: KP003_16230
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Entry
KP003_16230 CDS
T07937
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
gnt
Geomonas diazotrophica
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_16
TP_0454_N
AAA
TIP49
nSTAND3
AAA_19
AAA_2
AAA_22
VpsR
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QXE85890
LinkDB
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Position
complement(3711065..3712426)
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AA seq
453 aa
AA seq
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MPPKILIIDDDSSLRRVLEYNLQQEGYDVYTAADGSTGLQLFEEKSPQLVITDLKMPGIT
GFEVLSTVKERAPSTVVIVLTAFGAIDTAVEAMKLGAFHYLTKPFNREELKVTVLKGLQL
QGLSEENRLLKEELSGRTEFKSIVGTSRAMEGVFSVVRKVADTEATVLITGESGTGKELV
ARAIHSGSSRRAAPFVAVNCAAIPRDLLESELFGHVKGAFTGAIRDKEGKFQLADGGTIF
LDEVGDLPLELQPKLLRVLQERVVEPVGGTSLQKIDLRVVAATNADLERWIAEGKFREDL
YYRLSVIPVQLPPLRERVEDVPLLIRYFCGKFGAEAVTFSKEALQRLQEYAWPGNVRELE
NTVERLLIMREGDQIGVDELPAKIAAAAPAPEGGVLRLPAGGYSLEQLEMEVVLEALNRC
DWNQTAAARFLRIPRHTLIYRMEKYNISQPGRK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcccccaaagatactgatcatagatgacgacagctcgctcagacgcgtgctcgagtac
aacctgcagcaggaagggtacgacgtctacaccgccgccgacggctcgacgggtctgcag
cttttcgaggagaagtccccccaacttgtgatcaccgacctgaagatgccggggatcacc
gggttcgaggtcctctccacggtcaaggagcgtgccccctcgaccgtggtcatcgtcctg
accgccttcggcgccatcgacaccgccgtcgaggcgatgaagctcggtgcctttcattac
ctcaccaagcccttcaacagggaagaactgaaggtcaccgtgctgaaggggctccagttg
caggggctctccgaagagaaccgcctgctcaaggaggagctttccggccgcaccgaattc
aagagcatcgtgggcacctcccgcgccatggagggggttttttccgtggtgcgcaaggtg
gcggataccgaagcgaccgtcctgatcaccggggaatccgggaccggcaaggaactggtg
gcgcgggcgatccattccggcagttcccgccgggccgctcccttcgtggcggtcaattgc
gccgccataccgagggatctcctcgagagcgaactcttcggccacgtcaagggcgccttc
accggcgccatccgtgacaaggaagggaagttccagctcgcagacggcggcaccatcttc
ctggacgaggtgggggatctccccctcgaattgcagccgaagctgttgcgggtcttgcag
gagcgggtggtcgaaccggtgggggggacctcgctgcagaagatcgatctcagggtggtg
gcggctaccaacgccgacctcgagcgctggatcgcggaagggaagttccgcgaggacctc
tactaccggctctcggtgatcccggtccagctcccgccgctgcgcgaaagggtggaggac
gtgccgcttttgatccgctatttctgcggcaagttcggcgccgaagcggtgacgttctcg
aaggaggcgctgcagaggctgcaggagtatgcctggccgggaaacgtgcgcgagctggag
aacacggtggagcgcctgctcatcatgcgcgagggggaccagatcggggtggacgaactc
cccgccaagatcgcggccgcggcacctgctcccgaggggggggtgctcaggctccccgcc
ggcggttattcgctggaacagctcgagatggaggtggtcctggaggcgctcaaccgctgc
gactggaaccagaccgccgcggcgcgcttcctgcgcatcccgcgccacaccctgatctac
aggatggaaaagtacaatatctcgcaaccggggaggaaatga
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