Geomonas diazotrophica: KP003_16490
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Entry
KP003_16490 CDS
T07937
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
gnt
Geomonas diazotrophica
Pathway
gnt00470
D-Amino acid metabolism
gnt01100
Metabolic pathways
gnt01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KP003_16490 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
KP003_16490 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gnt01011
]
KP003_16490 (alr)
Enzymes [BR:
gnt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
KP003_16490 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
gnt01011
]
Precursor biosynthesis
Racemase
KP003_16490 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
QXE85940
LinkDB
All DBs
Position
complement(3762437..3763576)
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AA seq
379 aa
AA seq
DB search
MDSRPTVVEIDLAALRHNFGLVKRKVPKGCGILAVVKADAYGHGFQYVSEELEKLGVDAF
AVAFLAEGVQLRMSGIYRPVLILGGVYPGEERRCIGLNISTALYSLEQAAALDQAALEIK
CYRKAKIHLKVDTGMGRLGVPWDKVPEFLEQLKQFKNLEMEGIFSHFASADELDQDGLAF
TKLQAERFNAAVVEAHRQGFDPRYIHVANSAAILAAELPFCNLVRPGIILYGAAPSRDFA
AEQASLPVMKLKSRVAMLKWVEPGTSISYGRRYVADKRALIASVPVGYADGYCRSLTNKG
EALIRGKRARVAGTVCMDWIMLDVTDIEGVAVGDDVTLLGPDPMGDRISAEELAEKAGTI
PYEIMCGIATRRVRRVYIG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggacagtcgtcctacggtggtcgagatagatctcgccgcactcaggcacaacttcggg
ttggtaaagaggaaggtgcccaaggggtgcggcatacttgccgtggtcaaggccgatgcc
tacggccacggtttccagtacgtctccgaggagctggaaaagctcggggtagacgccttc
gccgttgccttcctcgcggaaggggtgcaactgcgcatgagcggcatctaccggccggtg
ctgatcctcggcggggtttatccaggcgaggagaggcgctgcatcgggttgaacatctcc
accgcgctctattcgttggagcaggcggcggcgctcgaccaggcggccctggagatcaag
tgctaccgcaaggcgaagatccacctgaaggtcgataccggaatggggcgtctcggggtt
ccctgggacaaggtgcccgaattccttgagcagctgaagcagttcaagaacctggagatg
gaggggatcttctcccacttcgcgagcgccgacgagctcgaccaggacggcctcgccttc
accaaactgcaggccgagcgcttcaacgccgccgtggtcgaggcccatcgccagggattc
gatccccgctacatccacgtcgccaacagcgccgccatcctcgcggccgagcttcccttc
tgcaacctggtgcgaccggggatcatcctctacggcgccgccccttcccgggatttcgcg
gccgagcaggcttccctgcccgtcatgaagctgaagagccgggtggcgatgctcaagtgg
gtggaacccgggaccagcatcagctacggcaggcgctacgttgccgacaagcgggccctc
atcgccagcgttcccgtggggtacgccgacggttattgccgcagtctcaccaacaagggg
gaggccctgatccgcggcaagcgggcgcgggtcgccggcaccgtctgcatggactggatc
atgctggacgtgaccgatatcgagggggttgccgttggggacgacgtgaccctcctggga
ccggacccgatgggcgaccgcatcagcgccgaggagttggccgagaaggccggcaccatc
ccctacgagatcatgtgcggcatcgccacccgccgcgtgcgcagggtgtacatcgggtag
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