KEGG   Geomonas nitrogeniifigens: KP003_18020
Entry
KP003_18020       CDS       T07937                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
gnt  Geomonas nitrogeniifigens
Brite
KEGG Orthology (KO) [BR:gnt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gnt03400]
    KP003_18020
Enzymes [BR:gnt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     KP003_18020
DNA repair and recombination proteins [BR:gnt03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    KP003_18020
SSDB
Motif
Pfam: Helicase_C_2 DEAD RadC ResIII Helicase_C DEAD_2 PhoH SecA_DEAD
Other DBs
NCBI-ProteinID: QXE86235
LinkDB
Position
4085605..4088106
AA seq 833 aa
MQKYFSALAIEHLRSAIAEANGNEVFFLGRTDEARVVVAVEPLARGNKDAVPAIMIACSF
GDVVIHNHPSGNLTPSQPDIEIASLLGNQGVGFYIVNNDASRANQVVAPFARKVVERLSY
PEVEHFYAPDGVLAQALPGYEHRPEQTRMALNLSEAFNEEKVAIVEAGTGTGKSLAYLLP
AALWSVRNKERVVVSTNTINLQEQLIQKDIPFLQQHAGVQFRAVLVKGRGNYLCLRKLRV
NAADASLFKDDTAQELDAIVAWSKKTEDGCRGDLAFIPKDEVWEELCCESDQCGRVKCPE
YPRCFFYKARREAAGADLLVVNHALLLADLSVRQETGYDATAILPPFTRLVFDEGHHLED
VATSFLSSQVSRLGLVKLLGKLQHPRKAHRGVLPQLSTQLSAAVPESQDDLYLEIAEVLE
GRLIPRRVAVLDAVTRGMDQIGEALFKKLKKDGVEQKLRVTPAIYSTPLWQEVTPHIENM
AKELSDYALAMQAFLKGCEKLSDKVLEKLAGPLTDLRGVKGRIECAVDALRFFMAREDEF
CRWFELRKGPLVKLCCSPLEVAESIKKAILDRFKTVVLTSATLAIGEKFDFLKHRTGIEL
LAKDRVSELLLPSPFDYAHQALVAVPSDMPEPTSPMFEARLCSHLLDALRISQGRAFVLF
TSYDLLIRVFNRLAEPLKAAGLTPMRQGETNRHMLLSKFRNSVSPVLFGTDSFWEGVDVQ
GRGLELVVITRLPFRVPTEPILEARSEHITAKGGDPFMSYTVPQAVIKFKQGFGRLIRSK
EDRGAVLILDSRVLTKNYGKIFLTALHGVTVQKSPEEEICRRLQEFFAVTPTT
NT seq 2502 nt   +upstreamnt  +downstreamnt
atgcaaaagtacttttcagctctcgccatcgagcatttacgcagcgccatcgcagaagca
aacggcaacgaggttttcttcctgggccgcaccgacgaggcacgcgtcgtcgtggcagtg
gagccgctggcccgcggcaacaaggacgccgtccccgccatcatgatcgcatgttccttc
ggggacgtggtgatccacaaccacccttccggcaacctcaccccctcgcaaccggacata
gagatcgcgtcgctcctggggaaccagggggtcggcttctacatcgtcaacaacgacgcc
tcccgcgccaaccaggtggtcgccccattcgcccggaaggtggtggagcgcctctcctac
ccggaggtcgagcacttctacgcccccgacggggtgctggcccaggccctgcccggctac
gagcaccgccccgagcagaccaggatggcgctcaacctctccgaagccttcaacgaggag
aaggtggccatcgtcgaggcggggaccgggaccgggaagtcgctggcctacctgctccct
gccgccctctggtcggtgcgcaacaaggaacgggtggtcgtctccaccaacaccatcaac
ctccaggagcagctgatccaaaaggacatccccttcctgcagcagcacgccggggtgcag
ttccgtgcggtgctggtcaagggacgcggcaactacctctgcctgaggaagctgcgggtg
aacgccgccgacgcctcgctgttcaaggacgacacggcacaggaactggacgccatcgtc
gcgtggagcaagaagaccgaggacggctgccgcggcgacctggccttcatccccaaggac
gaggtctgggaggagctttgctgcgagtcggaccagtgcggccgggtgaaatgcccggaa
tacccgcgctgcttcttctacaaggccagacgcgaggccgccggcgccgatctcctcgtg
gtcaaccacgccctgctgttggccgacctctcggtgcgccaggagaccggctacgacgcc
acggcgatcttgccccccttcacccggctcgttttcgacgaaggtcaccacctcgaggac
gtagccacaagcttcctctccagccaggtttcacgcctggggctggtcaagcttttaggc
aagctgcagcaccccaggaaggcacaccgcggcgtgctgccgcagctctccacccagctt
tccgccgccgtccccgaatcgcaggatgacctctacctggagatcgccgaggtcctggag
gggcgactgatcccgagaagggtcgcggtgctggatgcggtcactcgcggcatggaccag
atcggcgaggcgctgttcaagaagctgaagaaggacggggtggagcagaagctgcgggtg
acgccggcgatttacagtacgccgctctggcaggaggtgaccccgcacatcgagaacatg
gccaaggagctctcggactacgccctcgccatgcaggcgtttttgaagggttgcgagaag
ctctccgacaaggtgctggaaaagctggcgggaccgctcaccgatcttcgcggtgtgaag
gggaggatcgagtgcgccgtggatgccctgcgtttcttcatggcgcgggaggacgagttc
tgccgctggttcgagctgaggaaggggccgttggtgaaactctgctgttctccgctggag
gtggccgagtcgatcaagaaggcgatcctggaccgtttcaagaccgtcgtgctcacctcc
gcgaccctcgccatcggcgagaagttcgactttttaaagcaccgtaccgggatcgaactg
ctcgccaaggaccgggtgagcgaactgctgctcccctcgcccttcgactacgctcaccag
gcgctggtcgcggtcccctccgacatgcccgagccgacctccccgatgttcgaggcccgg
ctctgcagtcacctcttggacgcgctccggatctcgcaggggcgcgccttcgtcctcttc
acctcgtacgatctcctgatccgggtcttcaaccgcctcgcagagccgctgaaggccgcc
gggctcaccccgatgcgccagggggagaccaaccggcacatgctcctttccaagttccga
aactcggtcagcccggtgctcttcggtaccgattccttttgggagggggtggacgtgcag
gggcgggggctcgagctggtggtgatcacccggctaccgttcagagtccccaccgaaccg
atcctggaggcgaggagcgagcacatcaccgccaaggggggcgatcccttcatgagctac
acggtgccgcaggcggtgatcaagttcaagcaggggttcgggaggctgatccggagcaag
gaagaccgcggcgccgtgctgatcctggactcgcgggtgctgaccaagaactacggcaag
atcttcctgaccgcgctgcacggggtcacggtgcagaagtcgccggaagaagagatctgt
cggagactgcaggagttcttcgccgtaacgcccacgacctga

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