Geomonas nitrogeniifigens: KP003_18655
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Entry
KP003_18655 CDS
T07937
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
gnt
Geomonas nitrogeniifigens
Pathway
gnt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KP003_18655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gnt03400
]
KP003_18655
Enzymes [BR:
gnt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
KP003_18655
DNA repair and recombination proteins [BR:
gnt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KP003_18655
Prokaryotic type
KP003_18655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
MarR_2
HemN_C
MarR
HTH_24
HTH_20
HTH_IclR
HTH_27
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QXE86353
LinkDB
All DBs
Position
complement(4223555..4224412)
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AA seq
285 aa
AA seq
DB search
MSSPTAPWRRQVHKTVTTSEAASFRRIILDHYRTQGRRLPWRETRDPYAILVSEIMLQQT
QVDRVREKYLEFLAVFPTWQELAGAELSRVLSLWQGLGYNRRAVSLQLCARAVLQRFGGA
LPEEVERLESLPGIGPYTARAVAAFAFGLATPFIETNIRSVFIHHFFADAEAVRDAEILP
LVELTLDRDNPRDWYYALMDYGATLKRGGANPGRKSAHHVRQSPFRGSNREQRSLILKRI
LAQPGLSIARLEETLSLDAASLARNIAQLEREGLIRQEEGRLWVP
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtgtcatccccaacggcgccatggaggcggcaggtgcataagacagtaacgacatcggaa
gcggcgtctttccggcgcatcattctcgaccactaccgtacccagggacggcgcctcccc
tggcgggagacccgcgatccctacgccatcctcgtctccgagatcatgctgcagcagacc
caggtggaccgggtgcgcgaaaagtacctcgagttcctggccgtcttcccgacctggcag
gagctggccggtgcggaactctcccgggtgctgtcgctgtggcaggggcttggttacaac
aggcgcgcggtgtcgctgcagctttgcgcccgcgccgtactgcagcgcttcgggggggca
ctcccggaagaggtggagcggctggagtcgctgcccgggatcggcccctacaccgcccgc
gccgtcgccgccttcgccttcggcctcgccacccccttcatcgagaccaacatccgctcc
gtcttcatccaccatttctttgccgacgcagaagcggtgcgcgacgcggagatcctcccc
ctggtggagctcaccctggaccgggacaacccccgggattggtactacgcgcttatggac
tacggggccacgctcaagcgcggcggggcgaacccggggcgcaagagcgcccaccacgtg
cgccagtcgccgtttcggggctctaaccgggagcagcggagcctgatcctgaaaaggatc
ctggcgcagcccggtctgagcatcgcccgcctggaggagacgctctcactggatgccgcg
tcgctggcgcgcaacatcgcccaactggaacgggaagggctcatcaggcaggaagaagga
aggctctgggtgccttga
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