Geomonas diazotrophica: KP003_19615
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Entry
KP003_19615 CDS
T07937
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gnt
Geomonas diazotrophica
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gnt03032
]
KP003_19615 (gyrA)
03400 DNA repair and recombination proteins [BR:
gnt03400
]
KP003_19615 (gyrA)
Enzymes [BR:
gnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KP003_19615 (gyrA)
DNA replication proteins [BR:
gnt03032
]
Prokaryotic type
DNA Topoisomerases
KP003_19615 (gyrA)
DNA repair and recombination proteins [BR:
gnt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KP003_19615 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
QXE86537
LinkDB
All DBs
Position
4431986..4434499
Genome browser
AA seq
837 aa
AA seq
DB search
MLNQLNKVSVNIEDEMKRSYMDYAMSVIVGRALPDVRDGLKPVHRRCLYAMYDMSNDWNK
PYKKSARVVGDVIGKYHPHGDTAVYDTLVRMAQDFSLRYPLVDGQGNFGSIDGDSPAAMR
YTEIRMEQLAHELLNDLDKETVPFGPNYDDSLKEPLVLPSKFPNLLVNGSAGIAVGMATN
IPPHNLSEVVDAIVAIIDNPQLSFEELVELIPGPDFPTGGFIYGREGIMKAYSTGRGIIQ
MRAKVQIETQKKTERQSIVVTEIPYQVNKAKLVEKIAELVKEKKIEGISDLRDESDREGM
RVVIELKKDENPTIILNHLYKQTQMQSSFGIIMLAIVHNRPRVLTLKETIEFFIEHRKEI
VTRRTIFDLKKAEARAHILEGLKIALDNLDEVIALIKASASPAEAKVGLMEKFGLSDLQA
QAILDMRLHRLTGLEREKILEELREILKYIARLKEILASEAEILKIIVGELLELKDKFGD
KRRSEIVMQTADISLEDTIVEEDMVVTISHTGYIKRNAVTLYRAQRRGGKGKTGMKTKEE
DFVEQLFIASTKDYLMFFTDAGKVYWLKVYEIPEAGRAARGKAIVNLLNLANNEKITTIL
PVKEFVDDKFIMMATRNGVVKKTNMMEYSHPRVGGIIAVNLDEGDKLISVALTDGKQDVL
LATSNGKAIRFKEDDVRTVGRVSRGVRGMTLEDEDVVIGMEILNENFTDSTIFTVTENGY
GKRTEISEYRTQSRGGKGIITIKTTERNGQVVDIKQVVDDNDLMLITDQGKILRVSVAGF
SIIGRNTQGVRLMVKEENERVVAVARLAEKEDVEEIEDGSEIDDIVELEAEGGEGEE
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatcaactgaacaaggtatcggtaaacatcgaagacgaaatgaagcgctcgtac
atggactacgccatgtcggtcatcgtcgggcgcgcgcttccggacgtgcgcgacggcctg
aagccggtacacaggcgctgcctctacgccatgtacgacatgagcaacgactggaacaag
ccgtacaagaaatcggcccgtgtcgtcggcgacgtcatcggtaagtaccacccgcacggc
gacaccgccgtctacgacaccctggtcaggatggcccaggacttctcgctcaggtacccg
ctggtcgacggccagggcaacttcggctccatcgacggcgactccccggctgcgatgcgt
tacaccgagatcaggatggagcagctcgcccacgagctgttgaacgacctggacaaggaa
accgtcccgttcggcccgaactacgatgactccttgaaggagccgctggtcctcccctcc
aagttcccgaacctcctggtgaacggaagcgccggcatcgcggtcggcatggcgaccaac
atcccgccgcacaacctctccgaggtggtcgacgccatcgtggcgatcatcgataacccg
cagctctccttcgaggagctggtggagctgatcccgggcccggacttcccgaccggcggc
ttcatctacggccgcgaagggatcatgaaggcctactccaccggccgcggcatcatccag
atgcgcgccaaggtgcagatcgagacccagaagaagaccgagcgccagtccatcgtggtc
accgagatcccgtaccaggtgaacaaggcgaagctggtcgagaagatcgcggagctggtc
aaggagaagaagatcgaggggatctcggacctgcgtgacgagagcgaccgcgagggtatg
cgcgtcgtcatcgagctcaagaaggacgagaacccgaccatcatcctgaaccacctgtac
aagcagacccagatgcagtcctcattcggcatcatcatgctggccatcgtgcacaaccgg
ccgcgcgtgttgaccctgaaggagaccatcgagttcttcatcgagcacaggaaagagatt
gtcacccgccgcaccatcttcgacctgaagaaggccgaggccagggcccacatcctggaa
ggtctgaagatcgccctggacaacctggacgaggtgatcgccctgatcaaggcgagcgcg
tcgccggccgaggcgaaggttggcctcatggagaagttcgggctctccgacctgcaggcc
caggccatcctggacatgaggctgcaccgcctgaccggtctcgagcgcgagaagatcctc
gaagagctgcgcgagatcctgaaatacatcgcccgtctgaaggagatcctcgcctccgag
gccgagatcctcaagatcatcgtgggcgaactgctggagttgaaggacaagttcggcgac
aagcgccgctccgagatcgtcatgcagaccgcggacatctcgctggaggacaccatcgtc
gaggaagacatggtggtcaccatttcccacaccgggtacataaagcgcaacgccgtcacc
ctgtaccgcgcgcaacgccgcggcggcaagggtaagaccggcatgaagaccaaagaggag
gatttcgtggagcagctgttcatcgcctccaccaaggactacctcatgttcttcaccgac
gccggcaaggtgtactggttgaaggtgtacgagatcccggaggcgggtcgcgccgcgcgc
ggcaaggcgatcgtgaacctgttgaacctcgccaacaacgagaagatcaccaccatcctc
ccggtgaaggagttcgtggacgacaagttcatcatgatggccaccagaaacggcgtcgtg
aagaagaccaacatgatggagtactcgcacccgagggtgggcggcatcatcgccgtcaac
ctggacgaaggggacaagctcatctccgtggcgctcaccgacggcaagcaggacgtgctg
ctcgcgacctccaacggcaaggcgatccgcttcaaggaggacgacgtccgtaccgtgggg
cgcgtatcccgcggcgtgcgcggcatgacgctcgaggacgaggacgtggtgatcggcatg
gagatcctgaacgagaacttcaccgactccaccatcttcaccgtgaccgagaacggctac
ggcaagaggaccgagatcagcgagtaccgcacccagtcccgcggcggcaaggggatcatc
accatcaagaccaccgagcgcaacgggcaggtggtggacatcaagcaggtggtggacgac
aacgacctgatgctgatcaccgaccagggcaagatcctgcgcgtctccgttgccggcttc
tccatcatcggccgcaacacccagggggtgcgcctcatggtcaaggaagagaacgagcgc
gtggtcgccgtcgcacgcctggccgagaaagaggacgtggaagagatcgaggacgggtcg
gagatcgatgacatcgtcgaactcgaggcggagggtggcgaaggggaggagtaa
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