Geomonas nitrogeniifigens: KP003_20525
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Entry
KP003_20525 CDS
T07937
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gnt
Geomonas nitrogeniifigens
Pathway
gnt03030
DNA replication
gnt03430
Mismatch repair
gnt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KP003_20525 (dnaX)
03430 Mismatch repair
KP003_20525 (dnaX)
03440 Homologous recombination
KP003_20525 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gnt03032
]
KP003_20525 (dnaX)
03400 DNA repair and recombination proteins [BR:
gnt03400
]
KP003_20525 (dnaX)
Enzymes [BR:
gnt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KP003_20525 (dnaX)
DNA replication proteins [BR:
gnt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KP003_20525 (dnaX)
DNA repair and recombination proteins [BR:
gnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KP003_20525 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
AAA_5
AAA_2
AAA_16
AAA_30
AAA_14
PIF1
AAA_18
ResIII
Mg_chelatase
DUF815
AAA_19
Glyco_tranf_2_5
nSTAND3
DUF3646
AAA_24
DEAD
Motif
Other DBs
NCBI-ProteinID:
QXE86700
LinkDB
All DBs
Position
4632612..4634366
Genome browser
AA seq
584 aa
AA seq
DB search
MSYLVLARKWRPQTFSDLVGQEHVSQTLKNAIDGGRVAHAFLFTGARGVGKTSSARILAK
ALNCESGLTVEPCNTCSTCLEITEGNSVDVFEIDGASNTGVDDIRELRDNIKYLPSRSRY
KIFIIDEVHMLTTNAFNALLKTLEEPPPHVKFIFATTEPHKVPITILSRCQRFDFKRIAL
PRIVSRLRFIVDQEGVQVSDEALSVVARKGDGSMRDSLSTLDQVLAFCGNSVSDADVAAL
LGVVDRRLIMDGCRSVLEADVKGALGIVAQVDSFGYSMRQFCQELINQFRNIAILKAVGE
PGDLLELSDAELGELTALGGQASVQDLQRHLAILLKAEAEMAHAGFPRLILEMALIKMAS
LAPAIPVQDLLARLDALEKGGPLPPRAEAPRPSSPAPRPAQQSAPPQQQSPPSRPAAAPV
AAAPVAGAPPRPAAEPQAAPPAFASGGDLWGGFVQAVKAKKPMLGGALEEVYPVKVAQGV
LEIGCLQGSFQLTRLQDPEQINELKSLAQGHFGVPTQVKVVALSGPPSDAAPTLSEKKSL
EDAERKAVLRREAEEHPLVAVAVELFDGEIAEVQELPQKEAAKS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
ttgtcctatcttgtccttgctagaaaatggcgcccccagaccttcagcgacctggtcggc
caggagcatgtcagtcagaccctgaaaaacgccatcgacggcggcagggtggcacacgcc
tttctctttaccggcgcccgcggggtcggcaagaccagttctgcgcgcatcctggcgaag
gcactcaactgcgagagcggcctgaccgtggagccgtgcaacacctgctccacctgcctg
gagatcaccgaggggaactcggtcgacgtcttcgagatcgacggcgcctccaacaccggc
gtcgacgacatcagggagctgcgggacaacatcaagtacctcccctcgcgttcgcgctac
aagatattcatcatcgacgaagtgcacatgctgaccaccaacgccttcaacgcgcttttg
aagacgctggaggagccgccgccgcacgtcaagttcatcttcgccaccaccgaaccgcac
aaggtccccatcaccatcctgtcgcgctgccaacgcttcgacttcaagcggatcgcgctg
ccgcgcatcgtctcgaggctgcgtttcatcgtggaccaggagggggtgcaggtatccgac
gaggcgctctcggtcgtggccaggaagggggacggcagcatgcgcgattccctctccacg
ctggaccaggtgctcgccttctgtggcaacagcgtctccgatgccgacgtggccgcgctt
ttgggcgtggtggaccggcgcctgatcatggacggctgccgcagcgtgctcgaggctgac
gtcaagggggccctcggtatcgtggcccaggtcgattccttcggctacagcatgcgccag
ttctgccaggaactgatcaaccagttccgcaacatcgccatcctgaaggcggtcggggag
ccgggtgacctgctggagctctcggacgccgagctgggagagctgaccgcgctggggggg
caggcctcggtccaggacctgcagcgccacctggccatcctgctcaaggccgaggccgag
atggcgcacgcgggctttccgcgcctgatccttgagatggcgctgatcaagatggcgagt
ctcgccccggccatcccggtgcaggacctgctggcgcgcctcgacgccctggaaaagggg
ggaccgttgccgccgcgcgccgaagcgccgcgcccgtcctcccccgcgccgcgcccggca
cagcagtcggcgccgcctcagcagcagtcgccaccctcccgccccgccgcagctcccgtt
gcggcagcaccggtggcgggagccccgccgcgccccgccgcggagccgcaggcggcaccg
cccgcctttgcctccggcggcgacctctggggaggcttcgtgcaggcggtcaaggcgaag
aagccgatgctcggtggcgcgttggaagaggtctacccggtcaaggtggcccagggcgtc
ctggagatcggctgcctgcagggctccttccaactgacccggctgcaggatcctgagcag
atcaacgaactgaagagcctggcccaaggccatttcggcgtcccgacccaggtcaaggtg
gtcgcgctgagcgggcctccctcggacgccgccccgaccctgtcggaaaaaaaaagcctt
gaagacgccgagcgaaaggcagtcctgaggcgcgaggcggaggagcatccgctggtagcc
gtggcggtggagcttttcgacggcgagatcgccgaggtgcaggaacttccgcaaaaagaa
gcggcaaaatcataa
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