Geomonas diazotrophica: KP003_21075
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Entry
KP003_21075 CDS
T07937
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
gnt
Geomonas diazotrophica
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gnt03016
]
KP003_21075
Enzymes [BR:
gnt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
KP003_21075
Transfer RNA biogenesis [BR:
gnt03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
KP003_21075
Prokaryotic type
KP003_21075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
AAA_33
NTF2_6
PcrB
Motif
Other DBs
NCBI-ProteinID:
QXE86807
LinkDB
All DBs
Position
complement(4791152..4792165)
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AA seq
337 aa
AA seq
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MTPHFLPKLVNPPFGDPGVYVDFQFARRAILFDLGEIHRLGPRKILRLSDVCISHTHIDH
FIGFDLMLRVMLGRDMALRLFGPPGILRQVEHRLASYSWNLIQSYPTEFVITVTELHPDG
GAQRARFSSRRVFAREAEESFVFEDGVILDEENLRLRVAFLEHSIPCLAYAFEEKLHVNF
MKNRLAELGLPVGPWLSEVKRAVLRGEPDETVMTAPLPGVAEGQRLTIGALKEQVLQVVP
GEKIAYVTDTAFTPDNRRRIVELARGADYFFIEAVFLDVDADRARERAHLTARQAGELAR
EAGAARVIPFHFSPRHLEAEDELRREVDEAFAGNTPT
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgacgccccacttcctccccaagctggtgaacccacccttcggcgaccccggggtctac
gtcgacttccagttcgcccggcgggccatcctcttcgacctgggggagatccaccgtctc
ggtccccgcaagatccttcgcttaagcgacgtctgcatctcccacacccacatcgaccac
ttcatcggcttcgacctcatgctgcgcgtcatgctggggcgcgacatggcgctgcgcctg
ttcggcccccccggcatcctgcggcaggtcgagcaccggctcgcctcctacagctggaac
ctgatccagagctaccccaccgagttcgtcatcaccgttaccgagctgcaccccgacggc
ggcgcgcaaagggcccgcttcagttcccgacgcgtcttcgcccgggaggcggaggagagc
ttcgtcttcgaggatggcgtgatcctggacgaggagaacttgcgcctgcgcgtcgccttc
ctggagcacagcatcccctgcctcgcctacgccttcgaggagaagctgcatgtgaacttc
atgaagaaccggctggccgagttggggctcccggtcggaccgtggctctcggaggtgaag
cgcgccgtgctgcgcggtgagccggacgagacggtgatgacggcaccgctccccggggtg
gccgaagggcagcggctgaccatcggcgctctgaaagaacaggtgctgcaggtggtgccg
ggagaaaagatcgcctacgtcaccgacaccgcctttacccccgacaaccgccgccgcatc
gtcgagttggctcggggcgccgattacttcttcatcgaggcggtgttcctggacgtcgat
gccgaccgtgcccgcgagcgggcgcacctgaccgcccgacaggcgggggaactggcgcgc
gaggcaggcgctgcgcgggtgatcccgttccacttctcccctaggcacctggaggcggag
gatgaactgcgccgcgaggtcgacgaggcgttcgcgggaaataccccgacataa
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