Geomonas nitrogeniifigens: KP003_21150
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Entry
KP003_21150 CDS
T07937
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
gnt
Geomonas nitrogeniifigens
Pathway
gnt00020
Citrate cycle (TCA cycle)
gnt00640
Propanoate metabolism
gnt00660
C5-Branched dibasic acid metabolism
gnt00720
Other carbon fixation pathways
gnt01100
Metabolic pathways
gnt01110
Biosynthesis of secondary metabolites
gnt01120
Microbial metabolism in diverse environments
gnt01200
Carbon metabolism
Module
gnt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gnt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
KP003_21150 (sucD)
00640 Propanoate metabolism
KP003_21150 (sucD)
00660 C5-Branched dibasic acid metabolism
KP003_21150 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
KP003_21150 (sucD)
Enzymes [BR:
gnt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
KP003_21150 (sucD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QXE86821
LinkDB
All DBs
Position
complement(4810026..4810919)
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AA seq
297 aa
AA seq
DB search
MSILINNSSRIVVQGITGRSGLFHTQQCREYGSNIVAGVTPGKGGIHIEGIPVFNTVAEA
VKYTNANVSMIFVPPPGAADAILESAAAGLELAVCITEGIPVRDMVPVKAVLKQSKMRLV
GPNCPGVITPGECKIGIMPGHIHKPGKIGVVSRSGTLTYEAVKQLTDMGLGQSTCVGIGG
DPIIGMNFIDVLKLFNEDPGTEGVFMIGEIGGAAEEDAAHWIQEHMKKPVAAFIAGVTAP
PGKRMGHAGAIITGGKGKAEDKIRTLTECGVTVASSPTKMGEAMQMALAAKVNGKKK
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtccatattgatcaacaactcttccaggatagtggtccaggggatcaccggccgcagc
ggcctgttccacacccagcagtgccgcgagtacggcagcaacatcgtcgccggcgtgacg
cccggcaaggggggcatccacatcgaagggataccggtgttcaacacggtggccgaggcg
gtgaagtacaccaacgccaacgtctccatgatcttcgttcctccgccgggggcggctgac
gccatcctcgagtcggcggcggccgggctcgagctcgccgtctgcatcaccgaggggatt
ccggtgcgcgacatggtcccggtgaaggcggtgttgaagcagagcaagatgcggctggtc
ggccccaactgcccgggcgtgatcacgccgggcgagtgcaagatcggcatcatgcccggc
cacatacacaagcccggcaagatcggcgtcgtctcgcgctccggcacactcacctacgag
gcggtgaagcagctcaccgacatggggctcgggcagtcgacctgcgtggggatcgggggc
gacccgatcatcggcatgaacttcatcgacgtgctcaagctcttcaacgaggatccgggc
acggaaggggtcttcatgatcggcgagatcggcggggccgccgaggaggacgcggcgcac
tggatccaggaacacatgaaaaagccggtggcggccttcatcgccggggtcaccgcaccg
ccgggcaagaggatggggcacgccggcgccatcatcaccgggggcaaggggaaggcggag
gacaagatccgcaccctcaccgagtgcggcgtaacggtcgcgtccagcccgaccaagatg
ggcgaggcgatgcagatggccctcgccgccaaggtaaacggcaagaagaagtaa
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